Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
CCDC97Q96F63 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC97Q96F63 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC97Q96F63 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC97Q96F63 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC97Q96F63 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC97Q96F63 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC97Q96F63 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC97Q96F63 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC97Q96F63 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CCDC97Q96F63 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC97Q96F63 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC97Q96F63 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC97Q96F63 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
CCDC97Q96F63 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.78■□□□□ 0.76
CCDC97Q96F63 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CCDC97Q96F63 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC97Q96F63 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC97Q96F63 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
CCDC97Q96F63 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC97Q96F63 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.78■□□□□ 0.76
CCDC97Q96F63 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC97Q96F63 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC97Q96F63 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC97Q96F63 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CCDC97Q96F63 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC97Q96F63 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC97Q96F63 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC97Q96F63 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC97Q96F63 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CCDC97Q96F63 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC97Q96F63 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC97Q96F63 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC97Q96F63 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC97Q96F63 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC97Q96F63 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC97Q96F63 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
CCDC97Q96F63 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC97Q96F63 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC97Q96F63 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CCDC97Q96F63 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC97Q96F63 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC97Q96F63 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC97Q96F63 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.77■□□□□ 0.76
CCDC97Q96F63 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
CCDC97Q96F63 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC97Q96F63 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC97Q96F63 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC97Q96F63 AC023632.3-201ENST00000521633 145 ntBASIC19.77■□□□□ 0.76
CCDC97Q96F63 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC97Q96F63 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.77■□□□□ 0.76
CCDC97Q96F63 AC005829.2-201ENST00000571422 1056 ntBASIC19.77■□□□□ 0.76
CCDC97Q96F63 AC073912.3-201ENST00000624414 853 ntBASIC19.77■□□□□ 0.76
CCDC97Q96F63 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC97Q96F63 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC97Q96F63 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.77■□□□□ 0.76
CCDC97Q96F63 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
CCDC97Q96F63 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC97Q96F63 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC97Q96F63 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC97Q96F63 KRT8P20-201ENST00000423953 1409 ntBASIC19.76■□□□□ 0.75
CCDC97Q96F63 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC97Q96F63 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC97Q96F63 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC97Q96F63 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC97Q96F63 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC97Q96F63 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC97Q96F63 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC97Q96F63 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC97Q96F63 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC97Q96F63 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC97Q96F63 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC97Q96F63 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.76■□□□□ 0.75
CCDC97Q96F63 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC97Q96F63 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.76■□□□□ 0.75
CCDC97Q96F63 MIR4497-201ENST00000583208 89 ntBASIC19.76■□□□□ 0.75
CCDC97Q96F63 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CCDC97Q96F63 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC97Q96F63 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC97Q96F63 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC97Q96F63 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC97Q96F63 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC97Q96F63 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC97Q96F63 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC97Q96F63 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC97Q96F63 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CCDC97Q96F63 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
CCDC97Q96F63 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC97Q96F63 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC97Q96F63 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC97Q96F63 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
CCDC97Q96F63 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC97Q96F63 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.75■□□□□ 0.75
CCDC97Q96F63 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC97Q96F63 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC97Q96F63 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC97Q96F63 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.75■□□□□ 0.75
CCDC97Q96F63 SOX15-203ENST00000570788 1093 ntBASIC19.75■□□□□ 0.75
CCDC97Q96F63 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
CCDC97Q96F63 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms