Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.03■□□□□ 0.48
CTHRC1Q96CG8 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTHRC1Q96CG8 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CTHRC1Q96CG8 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTHRC1Q96CG8 AL353807.1-201ENST00000427475 662 ntBASIC18.03■□□□□ 0.48
CTHRC1Q96CG8 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.03■□□□□ 0.48
CTHRC1Q96CG8 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.03■□□□□ 0.48
CTHRC1Q96CG8 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.03■□□□□ 0.48
CTHRC1Q96CG8 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.03■□□□□ 0.48
CTHRC1Q96CG8 AL445675.2-201ENST00000620291 557 ntBASIC18.03■□□□□ 0.48
CTHRC1Q96CG8 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
CTHRC1Q96CG8 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CTHRC1Q96CG8 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CTHRC1Q96CG8 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.03■□□□□ 0.48
CTHRC1Q96CG8 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CTHRC1Q96CG8 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTHRC1Q96CG8 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CTHRC1Q96CG8 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
CTHRC1Q96CG8 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CTHRC1Q96CG8 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CTHRC1Q96CG8 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CTHRC1Q96CG8 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CTHRC1Q96CG8 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CTHRC1Q96CG8 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.02■□□□□ 0.48
CTHRC1Q96CG8 AL158047.1-201ENST00000445918 881 ntBASIC18.02■□□□□ 0.48
CTHRC1Q96CG8 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CTHRC1Q96CG8 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CTHRC1Q96CG8 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.02■□□□□ 0.48
CTHRC1Q96CG8 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.02■□□□□ 0.48
CTHRC1Q96CG8 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.02■□□□□ 0.48
CTHRC1Q96CG8 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CTHRC1Q96CG8 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CTHRC1Q96CG8 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.02■□□□□ 0.48
CTHRC1Q96CG8 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.02■□□□□ 0.48
CTHRC1Q96CG8 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CTHRC1Q96CG8 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.02■□□□□ 0.48
CTHRC1Q96CG8 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.02■□□□□ 0.48
CTHRC1Q96CG8 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.02■□□□□ 0.47
CTHRC1Q96CG8 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CTHRC1Q96CG8 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CTHRC1Q96CG8 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CTHRC1Q96CG8 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CTHRC1Q96CG8 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CTHRC1Q96CG8 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CTHRC1Q96CG8 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.47
CTHRC1Q96CG8 LINC01465-201ENST00000408887 1940 ntBASIC18.02■□□□□ 0.47
CTHRC1Q96CG8 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CTHRC1Q96CG8 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CTHRC1Q96CG8 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.01■□□□□ 0.47
CTHRC1Q96CG8 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.01■□□□□ 0.47
CTHRC1Q96CG8 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.01■□□□□ 0.47
CTHRC1Q96CG8 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CTHRC1Q96CG8 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CTHRC1Q96CG8 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CTHRC1Q96CG8 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CTHRC1Q96CG8 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.01■□□□□ 0.47
CTHRC1Q96CG8 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CTHRC1Q96CG8 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CTHRC1Q96CG8 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CTHRC1Q96CG8 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.01■□□□□ 0.47
CTHRC1Q96CG8 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.01■□□□□ 0.47
CTHRC1Q96CG8 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CTHRC1Q96CG8 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.01■□□□□ 0.47
CTHRC1Q96CG8 AL160286.2-201ENST00000567150 934 ntBASIC18.01■□□□□ 0.47
CTHRC1Q96CG8 AF186192.3-201ENST00000583427 947 ntBASIC18.01■□□□□ 0.47
CTHRC1Q96CG8 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.01■□□□□ 0.47
CTHRC1Q96CG8 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CTHRC1Q96CG8 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
CTHRC1Q96CG8 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.01■□□□□ 0.47
CTHRC1Q96CG8 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CTHRC1Q96CG8 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CTHRC1Q96CG8 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CTHRC1Q96CG8 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CTHRC1Q96CG8 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CTHRC1Q96CG8 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CTHRC1Q96CG8 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18■□□□□ 0.47
CTHRC1Q96CG8 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18■□□□□ 0.47
CTHRC1Q96CG8 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18■□□□□ 0.47
CTHRC1Q96CG8 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18■□□□□ 0.47
CTHRC1Q96CG8 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18■□□□□ 0.47
CTHRC1Q96CG8 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CTHRC1Q96CG8 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18■□□□□ 0.47
CTHRC1Q96CG8 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CTHRC1Q96CG8 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CTHRC1Q96CG8 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18■□□□□ 0.47
CTHRC1Q96CG8 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CTHRC1Q96CG8 KSR1P1-201ENST00000446298 240 ntBASIC18■□□□□ 0.47
CTHRC1Q96CG8 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18■□□□□ 0.47
CTHRC1Q96CG8 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18■□□□□ 0.47
CTHRC1Q96CG8 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CTHRC1Q96CG8 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18■□□□□ 0.47
CTHRC1Q96CG8 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18■□□□□ 0.47
CTHRC1Q96CG8 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CTHRC1Q96CG8 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18■□□□□ 0.47
CTHRC1Q96CG8 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18■□□□□ 0.47
CTHRC1Q96CG8 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
CTHRC1Q96CG8 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CTHRC1Q96CG8 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
CTHRC1Q96CG8 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CTHRC1Q96CG8 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms