Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.23■□□□□ 0.35
APH1AQ96BI3 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.23■□□□□ 0.35
APH1AQ96BI3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.23■□□□□ 0.35
APH1AQ96BI3 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
APH1AQ96BI3 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
APH1AQ96BI3 AC138932.1-201ENST00000534164 6830 ntBASIC17.23■□□□□ 0.35
APH1AQ96BI3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
APH1AQ96BI3 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
APH1AQ96BI3 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
APH1AQ96BI3 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.23■□□□□ 0.35
APH1AQ96BI3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
APH1AQ96BI3 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.23■□□□□ 0.35
APH1AQ96BI3 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
APH1AQ96BI3 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
APH1AQ96BI3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.22■□□□□ 0.35
APH1AQ96BI3 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
APH1AQ96BI3 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.22■□□□□ 0.35
APH1AQ96BI3 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
APH1AQ96BI3 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
APH1AQ96BI3 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
APH1AQ96BI3 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.22■□□□□ 0.35
APH1AQ96BI3 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
APH1AQ96BI3 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
APH1AQ96BI3 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
APH1AQ96BI3 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.22■□□□□ 0.35
APH1AQ96BI3 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.22■□□□□ 0.35
APH1AQ96BI3 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.22■□□□□ 0.35
APH1AQ96BI3 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
APH1AQ96BI3 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.22■□□□□ 0.35
APH1AQ96BI3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
APH1AQ96BI3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
APH1AQ96BI3 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
APH1AQ96BI3 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
APH1AQ96BI3 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
APH1AQ96BI3 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
APH1AQ96BI3 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
APH1AQ96BI3 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
APH1AQ96BI3 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
APH1AQ96BI3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
APH1AQ96BI3 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
APH1AQ96BI3 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
APH1AQ96BI3 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
APH1AQ96BI3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
APH1AQ96BI3 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.21■□□□□ 0.35
APH1AQ96BI3 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.21■□□□□ 0.35
APH1AQ96BI3 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
APH1AQ96BI3 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
APH1AQ96BI3 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
APH1AQ96BI3 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
APH1AQ96BI3 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.21■□□□□ 0.35
APH1AQ96BI3 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.21■□□□□ 0.35
APH1AQ96BI3 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.21■□□□□ 0.35
APH1AQ96BI3 CD177P1-201ENST00000606252 935 ntBASIC17.21■□□□□ 0.35
APH1AQ96BI3 AC113410.3-201ENST00000623366 203 ntBASIC17.21■□□□□ 0.35
APH1AQ96BI3 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
APH1AQ96BI3 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
APH1AQ96BI3 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.21■□□□□ 0.35
APH1AQ96BI3 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
APH1AQ96BI3 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
APH1AQ96BI3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
APH1AQ96BI3 KRT16P1-201ENST00000399124 1418 ntBASIC17.21■□□□□ 0.34
APH1AQ96BI3 AC073130.3-201ENST00000624389 2278 ntBASIC17.21■□□□□ 0.34
APH1AQ96BI3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
APH1AQ96BI3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
APH1AQ96BI3 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
APH1AQ96BI3 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
APH1AQ96BI3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
APH1AQ96BI3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
APH1AQ96BI3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
APH1AQ96BI3 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
APH1AQ96BI3 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.2■□□□□ 0.34
APH1AQ96BI3 FAM197Y1-201ENST00000421178 764 ntBASIC17.2■□□□□ 0.34
APH1AQ96BI3 SNORA78-201ENST00000459373 127 ntBASIC17.2■□□□□ 0.34
APH1AQ96BI3 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.2■□□□□ 0.34
APH1AQ96BI3 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.2■□□□□ 0.34
APH1AQ96BI3 AL445675.2-201ENST00000620291 557 ntBASIC17.2■□□□□ 0.34
APH1AQ96BI3 CR392000.1-201ENST00000624770 1228 ntBASIC17.2■□□□□ 0.34
APH1AQ96BI3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.2■□□□□ 0.34
APH1AQ96BI3 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
APH1AQ96BI3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.2■□□□□ 0.34
APH1AQ96BI3 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
APH1AQ96BI3 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
APH1AQ96BI3 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
APH1AQ96BI3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
APH1AQ96BI3 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
APH1AQ96BI3 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
APH1AQ96BI3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
APH1AQ96BI3 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.19■□□□□ 0.34
APH1AQ96BI3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
APH1AQ96BI3 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
APH1AQ96BI3 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
APH1AQ96BI3 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
APH1AQ96BI3 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
APH1AQ96BI3 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.19■□□□□ 0.34
APH1AQ96BI3 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.19■□□□□ 0.34
APH1AQ96BI3 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.19■□□□□ 0.34
APH1AQ96BI3 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.19■□□□□ 0.34
APH1AQ96BI3 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.19■□□□□ 0.34
APH1AQ96BI3 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.19■□□□□ 0.34
APH1AQ96BI3 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms