Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.45■□□□□ 0.38
CPNE4Q96A23 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE4Q96A23 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.45■□□□□ 0.38
CPNE4Q96A23 Z99916.2-201ENST00000604037 246 ntBASIC17.45■□□□□ 0.38
CPNE4Q96A23 AC073195.1-201ENST00000607241 877 ntBASIC17.45■□□□□ 0.38
CPNE4Q96A23 AL049637.2-201ENST00000641778 930 ntBASIC17.45■□□□□ 0.38
CPNE4Q96A23 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE4Q96A23 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE4Q96A23 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE4Q96A23 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CPNE4Q96A23 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE4Q96A23 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE4Q96A23 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.45■□□□□ 0.38
CPNE4Q96A23 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE4Q96A23 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE4Q96A23 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE4Q96A23 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE4Q96A23 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.44■□□□□ 0.38
CPNE4Q96A23 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE4Q96A23 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CPNE4Q96A23 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE4Q96A23 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE4Q96A23 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CPNE4Q96A23 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
CPNE4Q96A23 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.44■□□□□ 0.38
CPNE4Q96A23 KSR1P1-201ENST00000446298 240 ntBASIC17.44■□□□□ 0.38
CPNE4Q96A23 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE4Q96A23 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.44■□□□□ 0.38
CPNE4Q96A23 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE4Q96A23 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.44■□□□□ 0.38
CPNE4Q96A23 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.44■□□□□ 0.38
CPNE4Q96A23 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.44■□□□□ 0.38
CPNE4Q96A23 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.44■□□□□ 0.38
CPNE4Q96A23 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE4Q96A23 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE4Q96A23 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE4Q96A23 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.44■□□□□ 0.38
CPNE4Q96A23 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CPNE4Q96A23 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE4Q96A23 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CPNE4Q96A23 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.44■□□□□ 0.38
CPNE4Q96A23 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE4Q96A23 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE4Q96A23 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE4Q96A23 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE4Q96A23 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE4Q96A23 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.43■□□□□ 0.38
CPNE4Q96A23 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE4Q96A23 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE4Q96A23 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.43■□□□□ 0.38
CPNE4Q96A23 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CPNE4Q96A23 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.43■□□□□ 0.38
CPNE4Q96A23 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.43■□□□□ 0.38
CPNE4Q96A23 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE4Q96A23 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE4Q96A23 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE4Q96A23 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CPNE4Q96A23 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.43■□□□□ 0.38
CPNE4Q96A23 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE4Q96A23 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.43■□□□□ 0.38
CPNE4Q96A23 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.43■□□□□ 0.38
CPNE4Q96A23 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.43■□□□□ 0.38
CPNE4Q96A23 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE4Q96A23 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE4Q96A23 AC007952.6-201ENST00000573168 2673 ntBASIC17.43■□□□□ 0.38
CPNE4Q96A23 AC003957.1-201ENST00000625108 2673 ntBASIC17.43■□□□□ 0.38
CPNE4Q96A23 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
CPNE4Q96A23 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPNE4Q96A23 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE4Q96A23 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.42■□□□□ 0.38
CPNE4Q96A23 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CPNE4Q96A23 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE4Q96A23 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE4Q96A23 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE4Q96A23 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE4Q96A23 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE4Q96A23 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.42■□□□□ 0.38
CPNE4Q96A23 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE4Q96A23 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE4Q96A23 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE4Q96A23 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE4Q96A23 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
CPNE4Q96A23 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE4Q96A23 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE4Q96A23 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CPNE4Q96A23 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
CPNE4Q96A23 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE4Q96A23 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.42■□□□□ 0.38
CPNE4Q96A23 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE4Q96A23 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE4Q96A23 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.42■□□□□ 0.38
CPNE4Q96A23 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE4Q96A23 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE4Q96A23 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE4Q96A23 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.41■□□□□ 0.38
CPNE4Q96A23 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.41■□□□□ 0.38
CPNE4Q96A23 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE4Q96A23 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE4Q96A23 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE4Q96A23 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms