Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RNF34Q969K3 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RNF34Q969K3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF34Q969K3 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF34Q969K3 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF34Q969K3 HTR7P1-201ENST00000538670 1336 ntBASIC20.32■□□□□ 0.84
RNF34Q969K3 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF34Q969K3 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF34Q969K3 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
RNF34Q969K3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF34Q969K3 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RNF34Q969K3 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF34Q969K3 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF34Q969K3 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF34Q969K3 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.32■□□□□ 0.84
RNF34Q969K3 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF34Q969K3 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.32■□□□□ 0.84
RNF34Q969K3 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF34Q969K3 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.32■□□□□ 0.84
RNF34Q969K3 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF34Q969K3 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.32■□□□□ 0.84
RNF34Q969K3 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF34Q969K3 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF34Q969K3 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.32■□□□□ 0.84
RNF34Q969K3 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF34Q969K3 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
RNF34Q969K3 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF34Q969K3 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.32■□□□□ 0.84
RNF34Q969K3 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC20.31■□□□□ 0.84
RNF34Q969K3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RNF34Q969K3 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF34Q969K3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF34Q969K3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.31■□□□□ 0.84
RNF34Q969K3 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
RNF34Q969K3 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RNF34Q969K3 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF34Q969K3 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.31■□□□□ 0.84
RNF34Q969K3 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF34Q969K3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.31■□□□□ 0.84
RNF34Q969K3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF34Q969K3 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF34Q969K3 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF34Q969K3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RNF34Q969K3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF34Q969K3 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.3■□□□□ 0.84
RNF34Q969K3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.3■□□□□ 0.84
RNF34Q969K3 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.3■□□□□ 0.84
RNF34Q969K3 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF34Q969K3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
RNF34Q969K3 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF34Q969K3 KRT8P8-201ENST00000434750 1448 ntBASIC20.3■□□□□ 0.84
RNF34Q969K3 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.3■□□□□ 0.84
RNF34Q969K3 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF34Q969K3 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF34Q969K3 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF34Q969K3 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF34Q969K3 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.3■□□□□ 0.84
RNF34Q969K3 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF34Q969K3 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF34Q969K3 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.3■□□□□ 0.84
RNF34Q969K3 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
RNF34Q969K3 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.3■□□□□ 0.84
RNF34Q969K3 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.3■□□□□ 0.84
RNF34Q969K3 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF34Q969K3 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.3■□□□□ 0.84
RNF34Q969K3 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF34Q969K3 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF34Q969K3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF34Q969K3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF34Q969K3 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.3■□□□□ 0.84
RNF34Q969K3 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF34Q969K3 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF34Q969K3 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF34Q969K3 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
RNF34Q969K3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.3■□□□□ 0.84
RNF34Q969K3 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF34Q969K3 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF34Q969K3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RNF34Q969K3 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF34Q969K3 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.29■□□□□ 0.84
RNF34Q969K3 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF34Q969K3 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF34Q969K3 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF34Q969K3 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.29■□□□□ 0.84
RNF34Q969K3 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RNF34Q969K3 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RNF34Q969K3 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.29■□□□□ 0.84
RNF34Q969K3 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF34Q969K3 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
RNF34Q969K3 AC093827.2-201ENST00000512654 315 ntBASIC20.29■□□□□ 0.84
RNF34Q969K3 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF34Q969K3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF34Q969K3 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF34Q969K3 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RNF34Q969K3 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.29■□□□□ 0.84
RNF34Q969K3 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF34Q969K3 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.29■□□□□ 0.84
RNF34Q969K3 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF34Q969K3 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF34Q969K3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms