Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.12■□□□□ 0.33
AP3S1Q92572 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
AP3S1Q92572 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP3S1Q92572 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
AP3S1Q92572 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP3S1Q92572 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP3S1Q92572 MKRN4P-201ENST00000444706 1521 ntBASIC17.12■□□□□ 0.33
AP3S1Q92572 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AP3S1Q92572 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AP3S1Q92572 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP3S1Q92572 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP3S1Q92572 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP3S1Q92572 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.12■□□□□ 0.33
AP3S1Q92572 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
AP3S1Q92572 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC17.12■□□□□ 0.33
AP3S1Q92572 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.12■□□□□ 0.33
AP3S1Q92572 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP3S1Q92572 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP3S1Q92572 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.12■□□□□ 0.33
AP3S1Q92572 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AP3S1Q92572 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.12■□□□□ 0.33
AP3S1Q92572 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP3S1Q92572 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
AP3S1Q92572 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP3S1Q92572 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP3S1Q92572 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP3S1Q92572 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.11■□□□□ 0.33
AP3S1Q92572 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
AP3S1Q92572 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP3S1Q92572 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP3S1Q92572 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP3S1Q92572 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP3S1Q92572 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
AP3S1Q92572 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
AP3S1Q92572 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
AP3S1Q92572 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP3S1Q92572 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
AP3S1Q92572 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.11■□□□□ 0.33
AP3S1Q92572 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.11■□□□□ 0.33
AP3S1Q92572 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP3S1Q92572 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.11■□□□□ 0.33
AP3S1Q92572 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP3S1Q92572 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.11■□□□□ 0.33
AP3S1Q92572 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.11■□□□□ 0.33
AP3S1Q92572 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
AP3S1Q92572 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
AP3S1Q92572 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.1■□□□□ 0.33
AP3S1Q92572 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP3S1Q92572 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.1■□□□□ 0.33
AP3S1Q92572 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
AP3S1Q92572 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP3S1Q92572 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.1■□□□□ 0.33
AP3S1Q92572 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP3S1Q92572 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.1■□□□□ 0.33
AP3S1Q92572 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
AP3S1Q92572 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.1■□□□□ 0.33
AP3S1Q92572 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.1■□□□□ 0.33
AP3S1Q92572 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
AP3S1Q92572 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.1■□□□□ 0.33
AP3S1Q92572 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.1■□□□□ 0.33
AP3S1Q92572 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP3S1Q92572 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
AP3S1Q92572 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP3S1Q92572 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP3S1Q92572 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP3S1Q92572 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP3S1Q92572 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.1■□□□□ 0.33
AP3S1Q92572 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC17.1■□□□□ 0.33
AP3S1Q92572 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
AP3S1Q92572 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
AP3S1Q92572 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP3S1Q92572 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
AP3S1Q92572 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP3S1Q92572 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.1■□□□□ 0.33
AP3S1Q92572 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP3S1Q92572 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
AP3S1Q92572 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
AP3S1Q92572 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
AP3S1Q92572 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP3S1Q92572 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.1■□□□□ 0.33
AP3S1Q92572 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.1■□□□□ 0.33
AP3S1Q92572 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.09■□□□□ 0.33
AP3S1Q92572 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.09■□□□□ 0.33
AP3S1Q92572 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.09■□□□□ 0.33
AP3S1Q92572 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
AP3S1Q92572 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.09■□□□□ 0.33
AP3S1Q92572 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP3S1Q92572 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP3S1Q92572 AC097381.1-201ENST00000429019 1296 ntBASIC17.09■□□□□ 0.33
AP3S1Q92572 AC105265.2-201ENST00000467189 838 ntBASIC17.09■□□□□ 0.33
AP3S1Q92572 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.09■□□□□ 0.33
AP3S1Q92572 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP3S1Q92572 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.09■□□□□ 0.33
AP3S1Q92572 AL356652.1-201ENST00000615962 565 ntBASIC17.09■□□□□ 0.33
AP3S1Q92572 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.09■□□□□ 0.33
AP3S1Q92572 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP3S1Q92572 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
AP3S1Q92572 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.09■□□□□ 0.33
AP3S1Q92572 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
AP3S1Q92572 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms