Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 CD99P1-205ENST00000527459 561 ntBASIC18.96■□□□□ 0.63
ATL1Q8WXF7 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.96■□□□□ 0.63
ATL1Q8WXF7 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.96■□□□□ 0.63
ATL1Q8WXF7 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATL1Q8WXF7 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.96■□□□□ 0.63
ATL1Q8WXF7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATL1Q8WXF7 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.96■□□□□ 0.63
ATL1Q8WXF7 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATL1Q8WXF7 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATL1Q8WXF7 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
ATL1Q8WXF7 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATL1Q8WXF7 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATL1Q8WXF7 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATL1Q8WXF7 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATL1Q8WXF7 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATL1Q8WXF7 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
ATL1Q8WXF7 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATL1Q8WXF7 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.96■□□□□ 0.63
ATL1Q8WXF7 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATL1Q8WXF7 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.95■□□□□ 0.62
ATL1Q8WXF7 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATL1Q8WXF7 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATL1Q8WXF7 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ATL1Q8WXF7 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATL1Q8WXF7 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
ATL1Q8WXF7 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATL1Q8WXF7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATL1Q8WXF7 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
ATL1Q8WXF7 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
ATL1Q8WXF7 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ATL1Q8WXF7 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.95■□□□□ 0.62
ATL1Q8WXF7 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
ATL1Q8WXF7 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ATL1Q8WXF7 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATL1Q8WXF7 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
ATL1Q8WXF7 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.95■□□□□ 0.62
ATL1Q8WXF7 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATL1Q8WXF7 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATL1Q8WXF7 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATL1Q8WXF7 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.94■□□□□ 0.62
ATL1Q8WXF7 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ATL1Q8WXF7 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.94■□□□□ 0.62
ATL1Q8WXF7 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
ATL1Q8WXF7 AC093484.2-201ENST00000580996 2166 ntBASIC18.94■□□□□ 0.62
ATL1Q8WXF7 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ATL1Q8WXF7 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ATL1Q8WXF7 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.94■□□□□ 0.62
ATL1Q8WXF7 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.94■□□□□ 0.62
ATL1Q8WXF7 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.94■□□□□ 0.62
ATL1Q8WXF7 MTDHP1-201ENST00000605323 784 ntBASIC18.94■□□□□ 0.62
ATL1Q8WXF7 AC004264.1-201ENST00000608354 794 ntBASIC18.94■□□□□ 0.62
ATL1Q8WXF7 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.94■□□□□ 0.62
ATL1Q8WXF7 NBPF21P-201ENST00000425093 1451 ntBASIC18.94■□□□□ 0.62
ATL1Q8WXF7 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATL1Q8WXF7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
ATL1Q8WXF7 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.94■□□□□ 0.62
ATL1Q8WXF7 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
ATL1Q8WXF7 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
ATL1Q8WXF7 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATL1Q8WXF7 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATL1Q8WXF7 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ATL1Q8WXF7 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
ATL1Q8WXF7 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
ATL1Q8WXF7 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATL1Q8WXF7 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
ATL1Q8WXF7 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATL1Q8WXF7 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
ATL1Q8WXF7 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATL1Q8WXF7 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATL1Q8WXF7 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATL1Q8WXF7 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATL1Q8WXF7 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.93■□□□□ 0.62
ATL1Q8WXF7 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATL1Q8WXF7 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.93■□□□□ 0.62
ATL1Q8WXF7 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ATL1Q8WXF7 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.93■□□□□ 0.62
ATL1Q8WXF7 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.93■□□□□ 0.62
ATL1Q8WXF7 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.93■□□□□ 0.62
ATL1Q8WXF7 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.93■□□□□ 0.62
ATL1Q8WXF7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.93■□□□□ 0.62
ATL1Q8WXF7 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ATL1Q8WXF7 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.93■□□□□ 0.62
ATL1Q8WXF7 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.93■□□□□ 0.62
ATL1Q8WXF7 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ATL1Q8WXF7 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ATL1Q8WXF7 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATL1Q8WXF7 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.93■□□□□ 0.62
ATL1Q8WXF7 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ATL1Q8WXF7 AC116562.4-201ENST00000641316 2276 ntBASIC18.93■□□□□ 0.62
ATL1Q8WXF7 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATL1Q8WXF7 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATL1Q8WXF7 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ATL1Q8WXF7 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATL1Q8WXF7 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATL1Q8WXF7 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
ATL1Q8WXF7 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.92■□□□□ 0.62
ATL1Q8WXF7 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.92■□□□□ 0.62
ATL1Q8WXF7 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
ATL1Q8WXF7 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATL1Q8WXF7 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms