Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
SNED1Q8TER0 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SNED1Q8TER0 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC23.72■■□□□ 1.39
SNED1Q8TER0 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC23.72■■□□□ 1.39
SNED1Q8TER0 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SNED1Q8TER0 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC23.72■■□□□ 1.39
SNED1Q8TER0 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
SNED1Q8TER0 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SNED1Q8TER0 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
SNED1Q8TER0 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
SNED1Q8TER0 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SNED1Q8TER0 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SNED1Q8TER0 Telomerase-vert.1-201ENST00000363312 438 ntBASIC23.72■■□□□ 1.39
SNED1Q8TER0 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
SNED1Q8TER0 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC23.72■■□□□ 1.39
SNED1Q8TER0 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
SNED1Q8TER0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
SNED1Q8TER0 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC23.72■■□□□ 1.39
SNED1Q8TER0 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SNED1Q8TER0 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
SNED1Q8TER0 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SNED1Q8TER0 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC23.72■■□□□ 1.39
SNED1Q8TER0 CD37-204ENST00000535669 1674 ntTSL 2 BASIC23.71■■□□□ 1.39
SNED1Q8TER0 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
SNED1Q8TER0 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC23.71■■□□□ 1.39
SNED1Q8TER0 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC23.71■■□□□ 1.39
SNED1Q8TER0 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC23.71■■□□□ 1.39
SNED1Q8TER0 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC23.71■■□□□ 1.39
SNED1Q8TER0 MIR4674-201ENST00000582457 87 ntBASIC23.71■■□□□ 1.39
SNED1Q8TER0 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
SNED1Q8TER0 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SNED1Q8TER0 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC23.71■■□□□ 1.39
SNED1Q8TER0 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC23.71■■□□□ 1.39
SNED1Q8TER0 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC23.71■■□□□ 1.39
SNED1Q8TER0 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC23.7■■□□□ 1.39
SNED1Q8TER0 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
SNED1Q8TER0 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.39
SNED1Q8TER0 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
SNED1Q8TER0 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SNED1Q8TER0 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC23.7■■□□□ 1.38
SNED1Q8TER0 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC23.7■■□□□ 1.38
SNED1Q8TER0 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SNED1Q8TER0 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC23.7■■□□□ 1.38
SNED1Q8TER0 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SNED1Q8TER0 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SNED1Q8TER0 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
SNED1Q8TER0 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
SNED1Q8TER0 SMG8-203ENST00000578922 2178 ntBASIC23.7■■□□□ 1.38
SNED1Q8TER0 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC23.7■■□□□ 1.38
SNED1Q8TER0 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SNED1Q8TER0 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SNED1Q8TER0 FEM1AP1-201ENST00000431297 1995 ntBASIC23.69■■□□□ 1.38
SNED1Q8TER0 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SNED1Q8TER0 GCSHP2-201ENST00000560971 527 ntBASIC23.69■■□□□ 1.38
SNED1Q8TER0 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SNED1Q8TER0 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC23.69■■□□□ 1.38
SNED1Q8TER0 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC23.69■■□□□ 1.38
SNED1Q8TER0 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
SNED1Q8TER0 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
SNED1Q8TER0 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC23.69■■□□□ 1.38
SNED1Q8TER0 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
SNED1Q8TER0 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
SNED1Q8TER0 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SNED1Q8TER0 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC23.68■■□□□ 1.38
SNED1Q8TER0 PHB2-202ENST00000440277 996 ntTSL 5 BASIC23.68■■□□□ 1.38
SNED1Q8TER0 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC23.68■■□□□ 1.38
SNED1Q8TER0 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC23.68■■□□□ 1.38
SNED1Q8TER0 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC23.68■■□□□ 1.38
SNED1Q8TER0 PP7080-204ENST00000510714 601 ntTSL 3 BASIC23.68■■□□□ 1.38
SNED1Q8TER0 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SNED1Q8TER0 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.68■■□□□ 1.38
SNED1Q8TER0 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SNED1Q8TER0 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SNED1Q8TER0 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SNED1Q8TER0 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
SNED1Q8TER0 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
SNED1Q8TER0 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC23.67■■□□□ 1.38
SNED1Q8TER0 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SNED1Q8TER0 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
SNED1Q8TER0 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC23.67■■□□□ 1.38
SNED1Q8TER0 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SNED1Q8TER0 KRT8P11-201ENST00000409686 1436 ntBASIC23.67■■□□□ 1.38
SNED1Q8TER0 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
SNED1Q8TER0 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SNED1Q8TER0 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC23.67■■□□□ 1.38
SNED1Q8TER0 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SNED1Q8TER0 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC23.67■■□□□ 1.38
SNED1Q8TER0 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SNED1Q8TER0 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC23.67■■□□□ 1.38
SNED1Q8TER0 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
SNED1Q8TER0 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC23.67■■□□□ 1.38
SNED1Q8TER0 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SNED1Q8TER0 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
SNED1Q8TER0 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SNED1Q8TER0 ILF2-202ENST00000368681 726 ntTSL 2 BASIC23.67■■□□□ 1.38
SNED1Q8TER0 AC246785.2-201ENST00000432512 513 ntBASIC23.67■■□□□ 1.38
SNED1Q8TER0 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC23.67■■□□□ 1.38
SNED1Q8TER0 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SNED1Q8TER0 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SNED1Q8TER0 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC23.66■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms