Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ALMS1Q8TCU4 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ALMS1Q8TCU4 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
ALMS1Q8TCU4 BUB3-202ENST00000368859 667 ntTSL 3 BASIC13.13□□□□□ -0.31
ALMS1Q8TCU4 MIR662-201ENST00000384847 95 ntBASIC13.13□□□□□ -0.31
ALMS1Q8TCU4 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
ALMS1Q8TCU4 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC13.13□□□□□ -0.31
ALMS1Q8TCU4 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
ALMS1Q8TCU4 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
ALMS1Q8TCU4 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ALMS1Q8TCU4 KRT8P8-201ENST00000434750 1448 ntBASIC13.13□□□□□ -0.31
ALMS1Q8TCU4 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
ALMS1Q8TCU4 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC13.13□□□□□ -0.31
ALMS1Q8TCU4 ECEL1P1-201ENST00000373592 1742 ntBASIC13.13□□□□□ -0.31
ALMS1Q8TCU4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ALMS1Q8TCU4 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ALMS1Q8TCU4 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC13.13□□□□□ -0.31
ALMS1Q8TCU4 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
ALMS1Q8TCU4 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC13.13□□□□□ -0.31
ALMS1Q8TCU4 FOSL1P1-201ENST00000511041 816 ntBASIC13.13□□□□□ -0.31
ALMS1Q8TCU4 AL662844.1-201ENST00000546340 181 ntBASIC13.13□□□□□ -0.31
ALMS1Q8TCU4 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC13.13□□□□□ -0.31
ALMS1Q8TCU4 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
ALMS1Q8TCU4 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
ALMS1Q8TCU4 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ALMS1Q8TCU4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ALMS1Q8TCU4 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ALMS1Q8TCU4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
ALMS1Q8TCU4 GUSBP5-202ENST00000510805 1989 ntBASIC13.12□□□□□ -0.31
ALMS1Q8TCU4 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
ALMS1Q8TCU4 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC13.12□□□□□ -0.31
ALMS1Q8TCU4 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
ALMS1Q8TCU4 AC092183.1-201ENST00000469884 875 ntBASIC13.12□□□□□ -0.31
ALMS1Q8TCU4 BET1L-206ENST00000486280 665 ntTSL 3 BASIC13.12□□□□□ -0.31
ALMS1Q8TCU4 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
ALMS1Q8TCU4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC13.12□□□□□ -0.31
ALMS1Q8TCU4 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ALMS1Q8TCU4 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC13.12□□□□□ -0.31
ALMS1Q8TCU4 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ALMS1Q8TCU4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC13.12□□□□□ -0.31
ALMS1Q8TCU4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC13.12□□□□□ -0.31
ALMS1Q8TCU4 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
ALMS1Q8TCU4 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
ALMS1Q8TCU4 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ALMS1Q8TCU4 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ALMS1Q8TCU4 AP000867.3-201ENST00000524675 377 ntBASIC13.12□□□□□ -0.31
ALMS1Q8TCU4 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC13.12□□□□□ -0.31
ALMS1Q8TCU4 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ALMS1Q8TCU4 AP005901.3-202ENST00000581653 237 ntBASIC13.12□□□□□ -0.31
ALMS1Q8TCU4 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
ALMS1Q8TCU4 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ALMS1Q8TCU4 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
ALMS1Q8TCU4 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
ALMS1Q8TCU4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ALMS1Q8TCU4 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ALMS1Q8TCU4 CHCHD2P8-201ENST00000429873 447 ntBASIC13.12□□□□□ -0.31
ALMS1Q8TCU4 RASA4DP-201ENST00000460726 1199 ntBASIC13.12□□□□□ -0.31
ALMS1Q8TCU4 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC13.12□□□□□ -0.31
ALMS1Q8TCU4 AL160237.2-201ENST00000556165 472 ntBASIC13.12□□□□□ -0.31
ALMS1Q8TCU4 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ALMS1Q8TCU4 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ALMS1Q8TCU4 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ALMS1Q8TCU4 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC13.11□□□□□ -0.31
ALMS1Q8TCU4 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
ALMS1Q8TCU4 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC13.11□□□□□ -0.31
ALMS1Q8TCU4 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
ALMS1Q8TCU4 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC13.11□□□□□ -0.31
ALMS1Q8TCU4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ALMS1Q8TCU4 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ALMS1Q8TCU4 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC13.11□□□□□ -0.31
ALMS1Q8TCU4 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
ALMS1Q8TCU4 KRT16P4-201ENST00000453883 522 ntBASIC13.11□□□□□ -0.31
ALMS1Q8TCU4 PNN-202ENST00000553331 656 ntTSL 3 BASIC13.11□□□□□ -0.31
ALMS1Q8TCU4 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC13.11□□□□□ -0.31
ALMS1Q8TCU4 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
ALMS1Q8TCU4 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ALMS1Q8TCU4 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
ALMS1Q8TCU4 HLA-F-220ENST00000434407 884 ntBASIC13.11□□□□□ -0.31
ALMS1Q8TCU4 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ALMS1Q8TCU4 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC13.11□□□□□ -0.31
ALMS1Q8TCU4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ALMS1Q8TCU4 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ALMS1Q8TCU4 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ALMS1Q8TCU4 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ALMS1Q8TCU4 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC13.11□□□□□ -0.31
ALMS1Q8TCU4 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC13.11□□□□□ -0.31
ALMS1Q8TCU4 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
ALMS1Q8TCU4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC13.11□□□□□ -0.31
ALMS1Q8TCU4 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
ALMS1Q8TCU4 TUB-203ENST00000534099 1759 ntTSL 2 BASIC13.1□□□□□ -0.31
ALMS1Q8TCU4 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC13.1□□□□□ -0.31
ALMS1Q8TCU4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC13.1□□□□□ -0.31
ALMS1Q8TCU4 BX276092.5-203ENST00000456199 560 ntBASIC13.1□□□□□ -0.31
ALMS1Q8TCU4 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC13.1□□□□□ -0.31
ALMS1Q8TCU4 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
ALMS1Q8TCU4 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC13.1□□□□□ -0.31
ALMS1Q8TCU4 AL157888.1-201ENST00000631930 593 ntBASIC13.1□□□□□ -0.31
ALMS1Q8TCU4 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ALMS1Q8TCU4 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC13.1□□□□□ -0.31
ALMS1Q8TCU4 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms