Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH19Q8TAB3 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH19Q8TAB3 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH19Q8TAB3 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH19Q8TAB3 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH19Q8TAB3 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH19Q8TAB3 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH19Q8TAB3 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PCDH19Q8TAB3 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDH19Q8TAB3 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.06■□□□□ 0.8
PCDH19Q8TAB3 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.06■□□□□ 0.8
PCDH19Q8TAB3 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH19Q8TAB3 AL158047.1-201ENST00000445918 881 ntBASIC20.06■□□□□ 0.8
PCDH19Q8TAB3 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
PCDH19Q8TAB3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDH19Q8TAB3 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.06■□□□□ 0.8
PCDH19Q8TAB3 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.06■□□□□ 0.8
PCDH19Q8TAB3 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PCDH19Q8TAB3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH19Q8TAB3 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.06■□□□□ 0.8
PCDH19Q8TAB3 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.06■□□□□ 0.8
PCDH19Q8TAB3 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH19Q8TAB3 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH19Q8TAB3 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH19Q8TAB3 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH19Q8TAB3 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH19Q8TAB3 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDH19Q8TAB3 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH19Q8TAB3 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH19Q8TAB3 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH19Q8TAB3 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH19Q8TAB3 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH19Q8TAB3 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH19Q8TAB3 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.05■□□□□ 0.8
PCDH19Q8TAB3 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
PCDH19Q8TAB3 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDH19Q8TAB3 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.05■□□□□ 0.8
PCDH19Q8TAB3 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.05■□□□□ 0.8
PCDH19Q8TAB3 PRKY-204ENST00000533551 1019 ntBASIC20.05■□□□□ 0.8
PCDH19Q8TAB3 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDH19Q8TAB3 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH19Q8TAB3 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.05■□□□□ 0.8
PCDH19Q8TAB3 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH19Q8TAB3 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH19Q8TAB3 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.05■□□□□ 0.8
PCDH19Q8TAB3 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.05■□□□□ 0.8
PCDH19Q8TAB3 NBPF21P-201ENST00000425093 1451 ntBASIC20.05■□□□□ 0.8
PCDH19Q8TAB3 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH19Q8TAB3 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH19Q8TAB3 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
PCDH19Q8TAB3 AC098818.2-201ENST00000564925 2320 ntBASIC20.04■□□□□ 0.8
PCDH19Q8TAB3 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH19Q8TAB3 AC018445.3-201ENST00000624177 1945 ntBASIC20.04■□□□□ 0.8
PCDH19Q8TAB3 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH19Q8TAB3 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH19Q8TAB3 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH19Q8TAB3 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDH19Q8TAB3 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH19Q8TAB3 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH19Q8TAB3 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.04■□□□□ 0.8
PCDH19Q8TAB3 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH19Q8TAB3 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.04■□□□□ 0.8
PCDH19Q8TAB3 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH19Q8TAB3 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH19Q8TAB3 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
PCDH19Q8TAB3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH19Q8TAB3 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH19Q8TAB3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH19Q8TAB3 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDH19Q8TAB3 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDH19Q8TAB3 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
PCDH19Q8TAB3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH19Q8TAB3 SDHAP1-207ENST00000440850 2000 ntBASIC20.03■□□□□ 0.8
PCDH19Q8TAB3 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH19Q8TAB3 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDH19Q8TAB3 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH19Q8TAB3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH19Q8TAB3 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
PCDH19Q8TAB3 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH19Q8TAB3 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH19Q8TAB3 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
PCDH19Q8TAB3 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH19Q8TAB3 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.03■□□□□ 0.8
PCDH19Q8TAB3 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.03■□□□□ 0.8
PCDH19Q8TAB3 AC142381.4-202ENST00000563973 229 ntBASIC20.03■□□□□ 0.8
PCDH19Q8TAB3 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.03■□□□□ 0.8
PCDH19Q8TAB3 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.03■□□□□ 0.8
PCDH19Q8TAB3 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH19Q8TAB3 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH19Q8TAB3 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
PCDH19Q8TAB3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDH19Q8TAB3 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
PCDH19Q8TAB3 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
PCDH19Q8TAB3 AP000974.1-201ENST00000623909 2387 ntBASIC20.02■□□□□ 0.8
PCDH19Q8TAB3 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
PCDH19Q8TAB3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH19Q8TAB3 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH19Q8TAB3 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH19Q8TAB3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH19Q8TAB3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms