Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RFWD2Q8NHY2 AC004854.2-201ENST00000608450 1441 ntBASIC19.18■□□□□ 0.66
RFWD2Q8NHY2 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RFWD2Q8NHY2 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RFWD2Q8NHY2 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RFWD2Q8NHY2 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RFWD2Q8NHY2 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RFWD2Q8NHY2 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RFWD2Q8NHY2 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RFWD2Q8NHY2 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
RFWD2Q8NHY2 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RFWD2Q8NHY2 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RFWD2Q8NHY2 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RFWD2Q8NHY2 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RFWD2Q8NHY2 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RFWD2Q8NHY2 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.18■□□□□ 0.66
RFWD2Q8NHY2 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.18■□□□□ 0.66
RFWD2Q8NHY2 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.18■□□□□ 0.66
RFWD2Q8NHY2 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.18■□□□□ 0.66
RFWD2Q8NHY2 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.18■□□□□ 0.66
RFWD2Q8NHY2 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.18■□□□□ 0.66
RFWD2Q8NHY2 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.18■□□□□ 0.66
RFWD2Q8NHY2 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.18■□□□□ 0.66
RFWD2Q8NHY2 AC087623.3-201ENST00000607047 1098 ntBASIC19.18■□□□□ 0.66
RFWD2Q8NHY2 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RFWD2Q8NHY2 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RFWD2Q8NHY2 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.18■□□□□ 0.66
RFWD2Q8NHY2 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RFWD2Q8NHY2 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
RFWD2Q8NHY2 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RFWD2Q8NHY2 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RFWD2Q8NHY2 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RFWD2Q8NHY2 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RFWD2Q8NHY2 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RFWD2Q8NHY2 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.18■□□□□ 0.66
RFWD2Q8NHY2 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RFWD2Q8NHY2 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFWD2Q8NHY2 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
RFWD2Q8NHY2 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFWD2Q8NHY2 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
RFWD2Q8NHY2 AC141586.3-201ENST00000562166 1838 ntBASIC19.17■□□□□ 0.66
RFWD2Q8NHY2 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.17■□□□□ 0.66
RFWD2Q8NHY2 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.17■□□□□ 0.66
RFWD2Q8NHY2 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFWD2Q8NHY2 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFWD2Q8NHY2 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.17■□□□□ 0.66
RFWD2Q8NHY2 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFWD2Q8NHY2 PHGDH-210ENST00000641115 1638 ntBASIC19.17■□□□□ 0.66
RFWD2Q8NHY2 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.17■□□□□ 0.66
RFWD2Q8NHY2 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RFWD2Q8NHY2 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
RFWD2Q8NHY2 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFWD2Q8NHY2 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFWD2Q8NHY2 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFWD2Q8NHY2 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RFWD2Q8NHY2 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.16■□□□□ 0.66
RFWD2Q8NHY2 AL031598.1-201ENST00000561511 1773 ntBASIC19.16■□□□□ 0.66
RFWD2Q8NHY2 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFWD2Q8NHY2 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFWD2Q8NHY2 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFWD2Q8NHY2 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFWD2Q8NHY2 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.16■□□□□ 0.66
RFWD2Q8NHY2 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.16■□□□□ 0.66
RFWD2Q8NHY2 AC034268.1-201ENST00000441047 882 ntBASIC19.16■□□□□ 0.66
RFWD2Q8NHY2 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFWD2Q8NHY2 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.16■□□□□ 0.66
RFWD2Q8NHY2 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.16■□□□□ 0.66
RFWD2Q8NHY2 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFWD2Q8NHY2 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFWD2Q8NHY2 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.16■□□□□ 0.66
RFWD2Q8NHY2 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFWD2Q8NHY2 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFWD2Q8NHY2 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RFWD2Q8NHY2 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFWD2Q8NHY2 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.16■□□□□ 0.66
RFWD2Q8NHY2 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RFWD2Q8NHY2 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.15■□□□□ 0.66
RFWD2Q8NHY2 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFWD2Q8NHY2 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFWD2Q8NHY2 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFWD2Q8NHY2 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
RFWD2Q8NHY2 RARRES2P6-201ENST00000567333 442 ntBASIC19.15■□□□□ 0.66
RFWD2Q8NHY2 MIR6821-201ENST00000617625 74 ntBASIC19.15■□□□□ 0.66
RFWD2Q8NHY2 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
RFWD2Q8NHY2 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
RFWD2Q8NHY2 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFWD2Q8NHY2 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
RFWD2Q8NHY2 FP475955.4-201ENST00000623131 1990 ntBASIC19.15■□□□□ 0.66
RFWD2Q8NHY2 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFWD2Q8NHY2 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RFWD2Q8NHY2 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RFWD2Q8NHY2 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
RFWD2Q8NHY2 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RFWD2Q8NHY2 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
RFWD2Q8NHY2 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RFWD2Q8NHY2 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RFWD2Q8NHY2 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.14■□□□□ 0.65
RFWD2Q8NHY2 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RFWD2Q8NHY2 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RFWD2Q8NHY2 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms