Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLDND2Q8NHS1 AC020907.5-201ENST00000624372 1936 ntBASIC16.52■□□□□ 0.23
CLDND2Q8NHS1 AC092720.2-201ENST00000602388 1665 ntBASIC16.52■□□□□ 0.23
CLDND2Q8NHS1 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLDND2Q8NHS1 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.52■□□□□ 0.23
CLDND2Q8NHS1 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLDND2Q8NHS1 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.52■□□□□ 0.23
CLDND2Q8NHS1 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC16.52■□□□□ 0.23
CLDND2Q8NHS1 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
CLDND2Q8NHS1 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.52■□□□□ 0.23
CLDND2Q8NHS1 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.51■□□□□ 0.23
CLDND2Q8NHS1 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDND2Q8NHS1 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDND2Q8NHS1 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDND2Q8NHS1 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDND2Q8NHS1 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLDND2Q8NHS1 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CLDND2Q8NHS1 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLDND2Q8NHS1 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDND2Q8NHS1 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CLDND2Q8NHS1 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLDND2Q8NHS1 AP002982.1-201ENST00000492365 877 ntBASIC16.51■□□□□ 0.23
CLDND2Q8NHS1 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.51■□□□□ 0.23
CLDND2Q8NHS1 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.51■□□□□ 0.23
CLDND2Q8NHS1 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.51■□□□□ 0.23
CLDND2Q8NHS1 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.51■□□□□ 0.23
CLDND2Q8NHS1 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.51■□□□□ 0.23
CLDND2Q8NHS1 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.51■□□□□ 0.23
CLDND2Q8NHS1 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.51■□□□□ 0.23
CLDND2Q8NHS1 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.51■□□□□ 0.23
CLDND2Q8NHS1 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.51■□□□□ 0.23
CLDND2Q8NHS1 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDND2Q8NHS1 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDND2Q8NHS1 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDND2Q8NHS1 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLDND2Q8NHS1 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLDND2Q8NHS1 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CLDND2Q8NHS1 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDND2Q8NHS1 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDND2Q8NHS1 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDND2Q8NHS1 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLDND2Q8NHS1 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDND2Q8NHS1 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CLDND2Q8NHS1 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDND2Q8NHS1 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDND2Q8NHS1 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDND2Q8NHS1 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.5■□□□□ 0.23
CLDND2Q8NHS1 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDND2Q8NHS1 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDND2Q8NHS1 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.5■□□□□ 0.23
CLDND2Q8NHS1 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.5■□□□□ 0.23
CLDND2Q8NHS1 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDND2Q8NHS1 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDND2Q8NHS1 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CLDND2Q8NHS1 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.5■□□□□ 0.23
CLDND2Q8NHS1 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CLDND2Q8NHS1 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLDND2Q8NHS1 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC16.5■□□□□ 0.23
CLDND2Q8NHS1 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDND2Q8NHS1 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CLDND2Q8NHS1 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDND2Q8NHS1 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC16.5■□□□□ 0.23
CLDND2Q8NHS1 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
CLDND2Q8NHS1 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLDND2Q8NHS1 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDND2Q8NHS1 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDND2Q8NHS1 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDND2Q8NHS1 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDND2Q8NHS1 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLDND2Q8NHS1 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDND2Q8NHS1 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.49■□□□□ 0.23
CLDND2Q8NHS1 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLDND2Q8NHS1 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.49■□□□□ 0.23
CLDND2Q8NHS1 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
CLDND2Q8NHS1 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLDND2Q8NHS1 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CLDND2Q8NHS1 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLDND2Q8NHS1 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDND2Q8NHS1 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CLDND2Q8NHS1 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDND2Q8NHS1 AC087499.1-201ENST00000418141 1075 ntBASIC16.49■□□□□ 0.23
CLDND2Q8NHS1 KRT16P6-202ENST00000425692 1426 ntBASIC16.49■□□□□ 0.23
CLDND2Q8NHS1 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDND2Q8NHS1 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.49■□□□□ 0.23
CLDND2Q8NHS1 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CLDND2Q8NHS1 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.49■□□□□ 0.23
CLDND2Q8NHS1 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.49■□□□□ 0.23
CLDND2Q8NHS1 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
CLDND2Q8NHS1 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.49■□□□□ 0.23
CLDND2Q8NHS1 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.49■□□□□ 0.23
CLDND2Q8NHS1 AC133561.5-201ENST00000635547 218 ntBASIC16.49■□□□□ 0.23
CLDND2Q8NHS1 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDND2Q8NHS1 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDND2Q8NHS1 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDND2Q8NHS1 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.49■□□□□ 0.23
CLDND2Q8NHS1 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDND2Q8NHS1 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDND2Q8NHS1 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC16.49■□□□□ 0.23
CLDND2Q8NHS1 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDND2Q8NHS1 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms