Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC168Q8NDH2 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC168Q8NDH2 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC168Q8NDH2 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC168Q8NDH2 AP000867.3-201ENST00000524675 377 ntBASIC16.25■□□□□ 0.19
CCDC168Q8NDH2 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.25■□□□□ 0.19
CCDC168Q8NDH2 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.25■□□□□ 0.19
CCDC168Q8NDH2 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.25■□□□□ 0.19
CCDC168Q8NDH2 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CCDC168Q8NDH2 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.25■□□□□ 0.19
CCDC168Q8NDH2 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
CCDC168Q8NDH2 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC168Q8NDH2 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC168Q8NDH2 AC005229.4-201ENST00000610085 2198 ntBASIC16.25■□□□□ 0.19
CCDC168Q8NDH2 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC168Q8NDH2 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC168Q8NDH2 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC168Q8NDH2 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC168Q8NDH2 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC168Q8NDH2 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC168Q8NDH2 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC168Q8NDH2 BX842568.4-201ENST00000421222 227 ntBASIC16.25■□□□□ 0.19
CCDC168Q8NDH2 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.25■□□□□ 0.19
CCDC168Q8NDH2 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.25■□□□□ 0.19
CCDC168Q8NDH2 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC168Q8NDH2 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
CCDC168Q8NDH2 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC168Q8NDH2 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC168Q8NDH2 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC168Q8NDH2 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC168Q8NDH2 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.25■□□□□ 0.19
CCDC168Q8NDH2 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC168Q8NDH2 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC16.24■□□□□ 0.19
CCDC168Q8NDH2 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC168Q8NDH2 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC168Q8NDH2 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.24■□□□□ 0.19
CCDC168Q8NDH2 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC168Q8NDH2 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC168Q8NDH2 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC168Q8NDH2 TSSC2-201ENST00000450217 709 ntBASIC16.24■□□□□ 0.19
CCDC168Q8NDH2 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.24■□□□□ 0.19
CCDC168Q8NDH2 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.24■□□□□ 0.19
CCDC168Q8NDH2 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC168Q8NDH2 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.24■□□□□ 0.19
CCDC168Q8NDH2 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC168Q8NDH2 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC168Q8NDH2 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC168Q8NDH2 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC168Q8NDH2 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.24■□□□□ 0.19
CCDC168Q8NDH2 AC034232.1-201ENST00000506026 1064 ntBASIC16.24■□□□□ 0.19
CCDC168Q8NDH2 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC168Q8NDH2 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.24■□□□□ 0.19
CCDC168Q8NDH2 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC168Q8NDH2 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC168Q8NDH2 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC168Q8NDH2 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC168Q8NDH2 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.23■□□□□ 0.19
CCDC168Q8NDH2 RASA4DP-201ENST00000460726 1199 ntBASIC16.23■□□□□ 0.19
CCDC168Q8NDH2 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.23■□□□□ 0.19
CCDC168Q8NDH2 AL121912.1-201ENST00000603683 238 ntBASIC16.23■□□□□ 0.19
CCDC168Q8NDH2 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.23■□□□□ 0.19
CCDC168Q8NDH2 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC168Q8NDH2 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC168Q8NDH2 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC168Q8NDH2 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC168Q8NDH2 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
CCDC168Q8NDH2 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC168Q8NDH2 HLA-F-220ENST00000434407 884 ntBASIC16.23■□□□□ 0.19
CCDC168Q8NDH2 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC168Q8NDH2 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.23■□□□□ 0.19
CCDC168Q8NDH2 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.23■□□□□ 0.19
CCDC168Q8NDH2 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.23■□□□□ 0.19
CCDC168Q8NDH2 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.23■□□□□ 0.19
CCDC168Q8NDH2 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC168Q8NDH2 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC168Q8NDH2 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC168Q8NDH2 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CCDC168Q8NDH2 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC168Q8NDH2 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CCDC168Q8NDH2 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC168Q8NDH2 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC168Q8NDH2 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC168Q8NDH2 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC168Q8NDH2 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC168Q8NDH2 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC168Q8NDH2 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.22■□□□□ 0.19
CCDC168Q8NDH2 POLD2P1-201ENST00000511220 997 ntBASIC16.22■□□□□ 0.19
CCDC168Q8NDH2 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CCDC168Q8NDH2 KRT8P41-201ENST00000533985 1514 ntBASIC16.22■□□□□ 0.19
CCDC168Q8NDH2 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC168Q8NDH2 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC168Q8NDH2 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CCDC168Q8NDH2 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC168Q8NDH2 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC168Q8NDH2 AC242852.2-201ENST00000615738 1807 ntBASIC16.22■□□□□ 0.19
CCDC168Q8NDH2 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC168Q8NDH2 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC168Q8NDH2 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
CCDC168Q8NDH2 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC168Q8NDH2 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms