Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
TMEM35BQ8NCS4 RN7SL471P-201ENST00000580476 299 ntBASIC20.59■□□□□ 0.89
TMEM35BQ8NCS4 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.59■□□□□ 0.89
TMEM35BQ8NCS4 AL023875.1-201ENST00000640777 796 ntBASIC20.59■□□□□ 0.89
TMEM35BQ8NCS4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM35BQ8NCS4 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM35BQ8NCS4 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
TMEM35BQ8NCS4 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.59■□□□□ 0.89
TMEM35BQ8NCS4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM35BQ8NCS4 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
TMEM35BQ8NCS4 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.59■□□□□ 0.89
TMEM35BQ8NCS4 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.59■□□□□ 0.89
TMEM35BQ8NCS4 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
TMEM35BQ8NCS4 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
TMEM35BQ8NCS4 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM35BQ8NCS4 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM35BQ8NCS4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
TMEM35BQ8NCS4 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM35BQ8NCS4 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM35BQ8NCS4 AL032819.2-201ENST00000624543 2162 ntBASIC20.58■□□□□ 0.89
TMEM35BQ8NCS4 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM35BQ8NCS4 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
TMEM35BQ8NCS4 AC239809.2-201ENST00000415381 517 ntBASIC20.58■□□□□ 0.89
TMEM35BQ8NCS4 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.58■□□□□ 0.89
TMEM35BQ8NCS4 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.58■□□□□ 0.89
TMEM35BQ8NCS4 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM35BQ8NCS4 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.58■□□□□ 0.89
TMEM35BQ8NCS4 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM35BQ8NCS4 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TMEM35BQ8NCS4 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.58■□□□□ 0.88
TMEM35BQ8NCS4 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
TMEM35BQ8NCS4 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TMEM35BQ8NCS4 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TMEM35BQ8NCS4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TMEM35BQ8NCS4 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.57■□□□□ 0.88
TMEM35BQ8NCS4 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM35BQ8NCS4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM35BQ8NCS4 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.57■□□□□ 0.88
TMEM35BQ8NCS4 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM35BQ8NCS4 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM35BQ8NCS4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
TMEM35BQ8NCS4 KRASP1-201ENST00000407852 552 ntBASIC20.57■□□□□ 0.88
TMEM35BQ8NCS4 AC128676.1-201ENST00000454392 318 ntBASIC20.57■□□□□ 0.88
TMEM35BQ8NCS4 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.57■□□□□ 0.88
TMEM35BQ8NCS4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.57■□□□□ 0.88
TMEM35BQ8NCS4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
TMEM35BQ8NCS4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM35BQ8NCS4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM35BQ8NCS4 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.57■□□□□ 0.88
TMEM35BQ8NCS4 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM35BQ8NCS4 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.57■□□□□ 0.88
TMEM35BQ8NCS4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM35BQ8NCS4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM35BQ8NCS4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.56■□□□□ 0.88
TMEM35BQ8NCS4 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
TMEM35BQ8NCS4 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
TMEM35BQ8NCS4 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM35BQ8NCS4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.56■□□□□ 0.88
TMEM35BQ8NCS4 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM35BQ8NCS4 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM35BQ8NCS4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM35BQ8NCS4 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.56■□□□□ 0.88
TMEM35BQ8NCS4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.56■□□□□ 0.88
TMEM35BQ8NCS4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.56■□□□□ 0.88
TMEM35BQ8NCS4 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
TMEM35BQ8NCS4 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM35BQ8NCS4 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM35BQ8NCS4 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM35BQ8NCS4 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM35BQ8NCS4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM35BQ8NCS4 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
TMEM35BQ8NCS4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM35BQ8NCS4 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM35BQ8NCS4 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM35BQ8NCS4 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM35BQ8NCS4 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM35BQ8NCS4 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM35BQ8NCS4 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM35BQ8NCS4 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.55■□□□□ 0.88
TMEM35BQ8NCS4 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.55■□□□□ 0.88
TMEM35BQ8NCS4 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
TMEM35BQ8NCS4 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
TMEM35BQ8NCS4 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
TMEM35BQ8NCS4 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM35BQ8NCS4 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
TMEM35BQ8NCS4 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM35BQ8NCS4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM35BQ8NCS4 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM35BQ8NCS4 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM35BQ8NCS4 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
TMEM35BQ8NCS4 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM35BQ8NCS4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.54■□□□□ 0.88
TMEM35BQ8NCS4 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
TMEM35BQ8NCS4 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM35BQ8NCS4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM35BQ8NCS4 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM35BQ8NCS4 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM35BQ8NCS4 FAM201B-201ENST00000458407 597 ntBASIC20.54■□□□□ 0.88
TMEM35BQ8NCS4 AC133681.1-201ENST00000465482 601 ntBASIC20.54■□□□□ 0.88
TMEM35BQ8NCS4 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms