Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
C3orf56Q8N813 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
C3orf56Q8N813 AC138932.1-201ENST00000534164 6830 ntBASIC15.19■□□□□ 0.02
C3orf56Q8N813 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
C3orf56Q8N813 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
C3orf56Q8N813 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
C3orf56Q8N813 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC15.19■□□□□ 0.02
C3orf56Q8N813 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC15.19■□□□□ 0.02
C3orf56Q8N813 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
C3orf56Q8N813 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
C3orf56Q8N813 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
C3orf56Q8N813 DERL1-203ENST00000419562 918 ntTSL 2 BASIC15.19■□□□□ 0.02
C3orf56Q8N813 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.19■□□□□ 0.02
C3orf56Q8N813 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
C3orf56Q8N813 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.19■□□□□ 0.02
C3orf56Q8N813 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.19■□□□□ 0.02
C3orf56Q8N813 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
C3orf56Q8N813 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
C3orf56Q8N813 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
C3orf56Q8N813 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
C3orf56Q8N813 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
C3orf56Q8N813 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
C3orf56Q8N813 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC15.18■□□□□ 0.02
C3orf56Q8N813 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C3orf56Q8N813 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
C3orf56Q8N813 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
C3orf56Q8N813 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
C3orf56Q8N813 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC15.18■□□□□ 0.02
C3orf56Q8N813 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C3orf56Q8N813 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C3orf56Q8N813 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
C3orf56Q8N813 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
C3orf56Q8N813 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.18■□□□□ 0.02
C3orf56Q8N813 AL845331.1-201ENST00000424978 1190 ntBASIC15.18■□□□□ 0.02
C3orf56Q8N813 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC15.18■□□□□ 0.02
C3orf56Q8N813 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.18■□□□□ 0.02
C3orf56Q8N813 KRT18P38-201ENST00000449496 1282 ntBASIC15.18■□□□□ 0.02
C3orf56Q8N813 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
C3orf56Q8N813 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C3orf56Q8N813 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
C3orf56Q8N813 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C3orf56Q8N813 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
C3orf56Q8N813 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C3orf56Q8N813 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C3orf56Q8N813 LINC01311-201ENST00000565162 1445 ntBASIC15.17■□□□□ 0.02
C3orf56Q8N813 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
C3orf56Q8N813 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C3orf56Q8N813 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C3orf56Q8N813 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC15.17■□□□□ 0.02
C3orf56Q8N813 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC15.17■□□□□ 0.02
C3orf56Q8N813 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C3orf56Q8N813 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C3orf56Q8N813 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
C3orf56Q8N813 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C3orf56Q8N813 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C3orf56Q8N813 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C3orf56Q8N813 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C3orf56Q8N813 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
C3orf56Q8N813 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
C3orf56Q8N813 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C3orf56Q8N813 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
C3orf56Q8N813 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C3orf56Q8N813 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
C3orf56Q8N813 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC15.17■□□□□ 0.02
C3orf56Q8N813 AC018553.1-201ENST00000616682 1458 ntBASIC15.17■□□□□ 0.02
C3orf56Q8N813 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC15.17■□□□□ 0.02
C3orf56Q8N813 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C3orf56Q8N813 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC15.17■□□□□ 0.02
C3orf56Q8N813 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
C3orf56Q8N813 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
C3orf56Q8N813 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.17■□□□□ 0.02
C3orf56Q8N813 FDX1P1-201ENST00000449115 551 ntBASIC15.17■□□□□ 0.02
C3orf56Q8N813 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
C3orf56Q8N813 CA15P1-201ENST00000481698 905 ntBASIC15.17■□□□□ 0.02
C3orf56Q8N813 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC15.17■□□□□ 0.02
C3orf56Q8N813 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.17■□□□□ 0.02
C3orf56Q8N813 AC092329.2-201ENST00000598402 547 ntBASIC15.17■□□□□ 0.02
C3orf56Q8N813 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C3orf56Q8N813 AC092119.3-201ENST00000612618 583 ntBASIC15.17■□□□□ 0.02
C3orf56Q8N813 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC15.17■□□□□ 0.02
C3orf56Q8N813 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
C3orf56Q8N813 HLA-A-209ENST00000638375 975 ntBASIC15.17■□□□□ 0.02
C3orf56Q8N813 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
C3orf56Q8N813 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
C3orf56Q8N813 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC15.17■□□□□ 0.02
C3orf56Q8N813 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
C3orf56Q8N813 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C3orf56Q8N813 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C3orf56Q8N813 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
C3orf56Q8N813 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC15.16■□□□□ 0.02
C3orf56Q8N813 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC15.16■□□□□ 0.02
C3orf56Q8N813 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C3orf56Q8N813 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
C3orf56Q8N813 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
C3orf56Q8N813 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C3orf56Q8N813 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
C3orf56Q8N813 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C3orf56Q8N813 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C3orf56Q8N813 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C3orf56Q8N813 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms