Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC010947.1-201ENST00000623454 693 ntBASIC30.47■■■□□ 2.47
VPS8Q8N3P4 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
VPS8Q8N3P4 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
VPS8Q8N3P4 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
VPS8Q8N3P4 CYP2D8P-201ENST00000433633 1490 ntBASIC30.46■■■□□ 2.47
VPS8Q8N3P4 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
VPS8Q8N3P4 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
VPS8Q8N3P4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC30.46■■■□□ 2.47
VPS8Q8N3P4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC30.46■■■□□ 2.47
VPS8Q8N3P4 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC30.46■■■□□ 2.47
VPS8Q8N3P4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC30.46■■■□□ 2.47
VPS8Q8N3P4 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC30.46■■■□□ 2.47
VPS8Q8N3P4 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
VPS8Q8N3P4 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
VPS8Q8N3P4 FDX2-206ENST00000492239 773 ntTSL 2 BASIC30.46■■■□□ 2.47
VPS8Q8N3P4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC30.46■■■□□ 2.47
VPS8Q8N3P4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC30.46■■■□□ 2.47
VPS8Q8N3P4 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC30.45■■■□□ 2.47
VPS8Q8N3P4 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
VPS8Q8N3P4 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC30.45■■■□□ 2.47
VPS8Q8N3P4 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
VPS8Q8N3P4 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC30.45■■■□□ 2.47
VPS8Q8N3P4 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC30.45■■■□□ 2.47
VPS8Q8N3P4 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC30.45■■■□□ 2.47
VPS8Q8N3P4 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC30.45■■■□□ 2.47
VPS8Q8N3P4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC30.45■■■□□ 2.47
VPS8Q8N3P4 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC30.45■■■□□ 2.47
VPS8Q8N3P4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC30.45■■■□□ 2.46
VPS8Q8N3P4 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC30.45■■■□□ 2.46
VPS8Q8N3P4 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC30.45■■■□□ 2.46
VPS8Q8N3P4 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC30.45■■■□□ 2.46
VPS8Q8N3P4 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC30.45■■■□□ 2.46
VPS8Q8N3P4 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
VPS8Q8N3P4 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC30.44■■■□□ 2.46
VPS8Q8N3P4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
VPS8Q8N3P4 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
VPS8Q8N3P4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC30.44■■■□□ 2.46
VPS8Q8N3P4 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC30.44■■■□□ 2.46
VPS8Q8N3P4 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC30.44■■■□□ 2.46
VPS8Q8N3P4 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC30.44■■■□□ 2.46
VPS8Q8N3P4 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC30.44■■■□□ 2.46
VPS8Q8N3P4 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
VPS8Q8N3P4 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
VPS8Q8N3P4 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
VPS8Q8N3P4 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
VPS8Q8N3P4 POLI-202ENST00000406285 2030 ntTSL 2 BASIC30.43■■■□□ 2.46
VPS8Q8N3P4 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
VPS8Q8N3P4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
VPS8Q8N3P4 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
VPS8Q8N3P4 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC30.43■■■□□ 2.46
VPS8Q8N3P4 MFAP1P1-201ENST00000442257 1255 ntBASIC30.43■■■□□ 2.46
VPS8Q8N3P4 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
VPS8Q8N3P4 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC30.43■■■□□ 2.46
VPS8Q8N3P4 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC30.43■■■□□ 2.46
VPS8Q8N3P4 AC145285.6-201ENST00000604632 637 ntBASIC30.43■■■□□ 2.46
VPS8Q8N3P4 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
VPS8Q8N3P4 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
VPS8Q8N3P4 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC30.42■■■□□ 2.46
VPS8Q8N3P4 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC30.42■■■□□ 2.46
VPS8Q8N3P4 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC30.42■■■□□ 2.46
VPS8Q8N3P4 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
VPS8Q8N3P4 KRT8P11-201ENST00000409686 1436 ntBASIC30.42■■■□□ 2.46
VPS8Q8N3P4 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC30.42■■■□□ 2.46
VPS8Q8N3P4 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC30.42■■■□□ 2.46
VPS8Q8N3P4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC30.42■■■□□ 2.46
VPS8Q8N3P4 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC30.42■■■□□ 2.46
VPS8Q8N3P4 LINC01023-201ENST00000606054 436 ntBASIC30.42■■■□□ 2.46
VPS8Q8N3P4 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC30.42■■■□□ 2.46
VPS8Q8N3P4 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC30.42■■■□□ 2.46
VPS8Q8N3P4 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
VPS8Q8N3P4 TP73-202ENST00000354437 2140 ntTSL 5 BASIC30.42■■■□□ 2.46
VPS8Q8N3P4 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
VPS8Q8N3P4 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
VPS8Q8N3P4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
VPS8Q8N3P4 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
VPS8Q8N3P4 AC211429.1-201ENST00000415277 523 ntBASIC30.41■■■□□ 2.46
VPS8Q8N3P4 AC097488.1-201ENST00000507834 756 ntBASIC30.41■■■□□ 2.46
VPS8Q8N3P4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC30.41■■■□□ 2.46
VPS8Q8N3P4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC30.41■■■□□ 2.46
VPS8Q8N3P4 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
VPS8Q8N3P4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
VPS8Q8N3P4 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC30.41■■■□□ 2.46
VPS8Q8N3P4 ADM-207ENST00000530439 1839 ntTSL 2 BASIC30.41■■■□□ 2.46
VPS8Q8N3P4 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC30.41■■■□□ 2.46
VPS8Q8N3P4 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC30.41■■■□□ 2.46
VPS8Q8N3P4 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
VPS8Q8N3P4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC30.4■■■□□ 2.46
VPS8Q8N3P4 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC30.4■■■□□ 2.46
VPS8Q8N3P4 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
VPS8Q8N3P4 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC30.4■■■□□ 2.46
VPS8Q8N3P4 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC30.4■■■□□ 2.46
VPS8Q8N3P4 ECEL1P3-201ENST00000427961 737 ntBASIC30.4■■■□□ 2.46
VPS8Q8N3P4 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC30.4■■■□□ 2.46
VPS8Q8N3P4 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
VPS8Q8N3P4 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC30.4■■■□□ 2.46
VPS8Q8N3P4 AC133561.5-201ENST00000635547 218 ntBASIC30.4■■■□□ 2.46
VPS8Q8N3P4 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
VPS8Q8N3P4 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC30.4■■■□□ 2.46
VPS8Q8N3P4 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
VPS8Q8N3P4 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms