Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NPAS3Q8IXF0 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.12■□□□□ 0.81
NPAS3Q8IXF0 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
NPAS3Q8IXF0 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.12■□□□□ 0.81
NPAS3Q8IXF0 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.12■□□□□ 0.81
NPAS3Q8IXF0 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
NPAS3Q8IXF0 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NPAS3Q8IXF0 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NPAS3Q8IXF0 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.12■□□□□ 0.81
NPAS3Q8IXF0 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.12■□□□□ 0.81
NPAS3Q8IXF0 AL512604.3-201ENST00000569583 964 ntBASIC20.12■□□□□ 0.81
NPAS3Q8IXF0 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.12■□□□□ 0.81
NPAS3Q8IXF0 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.12■□□□□ 0.81
NPAS3Q8IXF0 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NPAS3Q8IXF0 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.12■□□□□ 0.81
NPAS3Q8IXF0 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
NPAS3Q8IXF0 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NPAS3Q8IXF0 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
NPAS3Q8IXF0 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
NPAS3Q8IXF0 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
NPAS3Q8IXF0 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NPAS3Q8IXF0 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NPAS3Q8IXF0 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NPAS3Q8IXF0 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
NPAS3Q8IXF0 FEM1AP1-201ENST00000431297 1995 ntBASIC20.12■□□□□ 0.81
NPAS3Q8IXF0 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NPAS3Q8IXF0 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NPAS3Q8IXF0 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.11■□□□□ 0.81
NPAS3Q8IXF0 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
NPAS3Q8IXF0 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
NPAS3Q8IXF0 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NPAS3Q8IXF0 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.11■□□□□ 0.81
NPAS3Q8IXF0 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
NPAS3Q8IXF0 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NPAS3Q8IXF0 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.11■□□□□ 0.81
NPAS3Q8IXF0 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.11■□□□□ 0.81
NPAS3Q8IXF0 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NPAS3Q8IXF0 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
NPAS3Q8IXF0 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.11■□□□□ 0.81
NPAS3Q8IXF0 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.11■□□□□ 0.81
NPAS3Q8IXF0 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.11■□□□□ 0.81
NPAS3Q8IXF0 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.11■□□□□ 0.81
NPAS3Q8IXF0 AP000550.4-202ENST00000639755 178 ntBASIC20.11■□□□□ 0.81
NPAS3Q8IXF0 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.11■□□□□ 0.81
NPAS3Q8IXF0 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NPAS3Q8IXF0 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NPAS3Q8IXF0 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NPAS3Q8IXF0 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
NPAS3Q8IXF0 KRT8P41-201ENST00000533985 1514 ntBASIC20.11■□□□□ 0.81
NPAS3Q8IXF0 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
NPAS3Q8IXF0 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NPAS3Q8IXF0 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NPAS3Q8IXF0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
NPAS3Q8IXF0 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.11■□□□□ 0.81
NPAS3Q8IXF0 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.1■□□□□ 0.81
NPAS3Q8IXF0 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NPAS3Q8IXF0 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NPAS3Q8IXF0 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
NPAS3Q8IXF0 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NPAS3Q8IXF0 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.1■□□□□ 0.81
NPAS3Q8IXF0 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.1■□□□□ 0.81
NPAS3Q8IXF0 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.1■□□□□ 0.81
NPAS3Q8IXF0 CKBP1-201ENST00000565489 1086 ntBASIC20.1■□□□□ 0.81
NPAS3Q8IXF0 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NPAS3Q8IXF0 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.1■□□□□ 0.81
NPAS3Q8IXF0 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NPAS3Q8IXF0 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NPAS3Q8IXF0 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NPAS3Q8IXF0 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NPAS3Q8IXF0 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NPAS3Q8IXF0 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.1■□□□□ 0.81
NPAS3Q8IXF0 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
NPAS3Q8IXF0 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
NPAS3Q8IXF0 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.1■□□□□ 0.81
NPAS3Q8IXF0 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
NPAS3Q8IXF0 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.09■□□□□ 0.81
NPAS3Q8IXF0 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
NPAS3Q8IXF0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NPAS3Q8IXF0 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
NPAS3Q8IXF0 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NPAS3Q8IXF0 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NPAS3Q8IXF0 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
NPAS3Q8IXF0 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.09■□□□□ 0.81
NPAS3Q8IXF0 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
NPAS3Q8IXF0 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NPAS3Q8IXF0 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.09■□□□□ 0.81
NPAS3Q8IXF0 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.09■□□□□ 0.81
NPAS3Q8IXF0 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NPAS3Q8IXF0 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.09■□□□□ 0.81
NPAS3Q8IXF0 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.09■□□□□ 0.81
NPAS3Q8IXF0 HOMER2P1-201ENST00000455653 964 ntBASIC20.09■□□□□ 0.81
NPAS3Q8IXF0 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.09■□□□□ 0.81
NPAS3Q8IXF0 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NPAS3Q8IXF0 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.09■□□□□ 0.81
NPAS3Q8IXF0 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.09■□□□□ 0.81
NPAS3Q8IXF0 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.09■□□□□ 0.81
NPAS3Q8IXF0 AL023973.1-201ENST00000624619 620 ntBASIC20.09■□□□□ 0.81
NPAS3Q8IXF0 AL121956.5-201ENST00000625261 221 ntBASIC20.09■□□□□ 0.81
NPAS3Q8IXF0 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
NPAS3Q8IXF0 AL031432.5-201ENST00000641059 760 ntBASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 380.1 ms