Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.01■□□□□ 0.63
VRK3Q8IV63 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VRK3Q8IV63 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
VRK3Q8IV63 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VRK3Q8IV63 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.01■□□□□ 0.63
VRK3Q8IV63 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.01■□□□□ 0.63
VRK3Q8IV63 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VRK3Q8IV63 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VRK3Q8IV63 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.01■□□□□ 0.63
VRK3Q8IV63 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.01■□□□□ 0.63
VRK3Q8IV63 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VRK3Q8IV63 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
VRK3Q8IV63 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VRK3Q8IV63 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VRK3Q8IV63 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VRK3Q8IV63 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.01■□□□□ 0.63
VRK3Q8IV63 AC104417.2-201ENST00000562989 1793 ntBASIC19.01■□□□□ 0.63
VRK3Q8IV63 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
VRK3Q8IV63 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
VRK3Q8IV63 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.01■□□□□ 0.63
VRK3Q8IV63 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VRK3Q8IV63 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VRK3Q8IV63 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19■□□□□ 0.63
VRK3Q8IV63 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
VRK3Q8IV63 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19■□□□□ 0.63
VRK3Q8IV63 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VRK3Q8IV63 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VRK3Q8IV63 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VRK3Q8IV63 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19■□□□□ 0.63
VRK3Q8IV63 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19■□□□□ 0.63
VRK3Q8IV63 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19■□□□□ 0.63
VRK3Q8IV63 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19■□□□□ 0.63
VRK3Q8IV63 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19■□□□□ 0.63
VRK3Q8IV63 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19■□□□□ 0.63
VRK3Q8IV63 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
VRK3Q8IV63 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19■□□□□ 0.63
VRK3Q8IV63 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19■□□□□ 0.63
VRK3Q8IV63 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19■□□□□ 0.63
VRK3Q8IV63 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VRK3Q8IV63 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VRK3Q8IV63 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19■□□□□ 0.63
VRK3Q8IV63 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
VRK3Q8IV63 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VRK3Q8IV63 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19■□□□□ 0.63
VRK3Q8IV63 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19■□□□□ 0.63
VRK3Q8IV63 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
VRK3Q8IV63 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
VRK3Q8IV63 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VRK3Q8IV63 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.99■□□□□ 0.63
VRK3Q8IV63 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.99■□□□□ 0.63
VRK3Q8IV63 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
VRK3Q8IV63 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.99■□□□□ 0.63
VRK3Q8IV63 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
VRK3Q8IV63 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.99■□□□□ 0.63
VRK3Q8IV63 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
VRK3Q8IV63 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
VRK3Q8IV63 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
VRK3Q8IV63 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
VRK3Q8IV63 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.99■□□□□ 0.63
VRK3Q8IV63 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.99■□□□□ 0.63
VRK3Q8IV63 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.99■□□□□ 0.63
VRK3Q8IV63 SDHAP1-207ENST00000440850 2000 ntBASIC18.99■□□□□ 0.63
VRK3Q8IV63 AC005332.7-201ENST00000614046 2005 ntBASIC18.99■□□□□ 0.63
VRK3Q8IV63 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VRK3Q8IV63 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
VRK3Q8IV63 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.99■□□□□ 0.63
VRK3Q8IV63 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
VRK3Q8IV63 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VRK3Q8IV63 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VRK3Q8IV63 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
VRK3Q8IV63 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.99■□□□□ 0.63
VRK3Q8IV63 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VRK3Q8IV63 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
VRK3Q8IV63 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
VRK3Q8IV63 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VRK3Q8IV63 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VRK3Q8IV63 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
VRK3Q8IV63 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.98■□□□□ 0.63
VRK3Q8IV63 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VRK3Q8IV63 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VRK3Q8IV63 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
VRK3Q8IV63 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.98■□□□□ 0.63
VRK3Q8IV63 UBE2SP1-201ENST00000450587 669 ntBASIC18.98■□□□□ 0.63
VRK3Q8IV63 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VRK3Q8IV63 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.98■□□□□ 0.63
VRK3Q8IV63 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
VRK3Q8IV63 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.98■□□□□ 0.63
VRK3Q8IV63 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
VRK3Q8IV63 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VRK3Q8IV63 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VRK3Q8IV63 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VRK3Q8IV63 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VRK3Q8IV63 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
VRK3Q8IV63 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VRK3Q8IV63 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
VRK3Q8IV63 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VRK3Q8IV63 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.97■□□□□ 0.63
VRK3Q8IV63 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
VRK3Q8IV63 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VRK3Q8IV63 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms