Protein–RNA interactions for Protein: Q8IUA7

ABCA9, ATP-binding cassette sub-family A member 9, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA9Q8IUA7 AC006128.1-201ENST00000624704 1661 ntBASIC29.68■■■□□ 2.34
ABCA9Q8IUA7 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
ABCA9Q8IUA7 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
ABCA9Q8IUA7 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC29.67■■■□□ 2.34
ABCA9Q8IUA7 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
ABCA9Q8IUA7 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC29.67■■■□□ 2.34
ABCA9Q8IUA7 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC29.67■■■□□ 2.34
ABCA9Q8IUA7 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC29.67■■■□□ 2.34
ABCA9Q8IUA7 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
ABCA9Q8IUA7 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
ABCA9Q8IUA7 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
ABCA9Q8IUA7 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC29.67■■■□□ 2.34
ABCA9Q8IUA7 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
ABCA9Q8IUA7 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
ABCA9Q8IUA7 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
ABCA9Q8IUA7 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC29.67■■■□□ 2.34
ABCA9Q8IUA7 SLC25A6P4-201ENST00000586535 553 ntBASIC29.67■■■□□ 2.34
ABCA9Q8IUA7 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
ABCA9Q8IUA7 GPALPP1-207ENST00000611650 899 ntBASIC29.67■■■□□ 2.34
ABCA9Q8IUA7 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC29.67■■■□□ 2.34
ABCA9Q8IUA7 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC29.67■■■□□ 2.34
ABCA9Q8IUA7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
ABCA9Q8IUA7 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
ABCA9Q8IUA7 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
ABCA9Q8IUA7 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
ABCA9Q8IUA7 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC29.66■■■□□ 2.34
ABCA9Q8IUA7 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
ABCA9Q8IUA7 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC29.66■■■□□ 2.34
ABCA9Q8IUA7 CALM1-205ENST00000553542 877 ntTSL 5 BASIC29.66■■■□□ 2.34
ABCA9Q8IUA7 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC29.66■■■□□ 2.34
ABCA9Q8IUA7 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC29.66■■■□□ 2.34
ABCA9Q8IUA7 FEM1AP1-201ENST00000431297 1995 ntBASIC29.66■■■□□ 2.34
ABCA9Q8IUA7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
ABCA9Q8IUA7 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC29.65■■■□□ 2.34
ABCA9Q8IUA7 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC29.65■■■□□ 2.34
ABCA9Q8IUA7 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC29.65■■■□□ 2.34
ABCA9Q8IUA7 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC29.65■■■□□ 2.34
ABCA9Q8IUA7 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC29.65■■■□□ 2.34
ABCA9Q8IUA7 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
ABCA9Q8IUA7 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC29.65■■■□□ 2.34
ABCA9Q8IUA7 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
ABCA9Q8IUA7 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC29.65■■■□□ 2.34
ABCA9Q8IUA7 AC007225.1-201ENST00000566331 1836 ntBASIC29.64■■■□□ 2.34
ABCA9Q8IUA7 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC29.64■■■□□ 2.34
ABCA9Q8IUA7 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC29.64■■■□□ 2.34
ABCA9Q8IUA7 BX276092.5-203ENST00000456199 560 ntBASIC29.64■■■□□ 2.34
ABCA9Q8IUA7 EMBP1-201ENST00000458200 901 ntBASIC29.64■■■□□ 2.34
ABCA9Q8IUA7 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC29.64■■■□□ 2.34
ABCA9Q8IUA7 TPSP2-201ENST00000561760 610 ntBASIC29.64■■■□□ 2.34
ABCA9Q8IUA7 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC29.64■■■□□ 2.34
ABCA9Q8IUA7 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC29.64■■■□□ 2.34
ABCA9Q8IUA7 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
ABCA9Q8IUA7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC29.64■■■□□ 2.33
ABCA9Q8IUA7 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC29.64■■■□□ 2.33
ABCA9Q8IUA7 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
ABCA9Q8IUA7 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC29.63■■■□□ 2.33
ABCA9Q8IUA7 TBCB-205ENST00000585746 875 ntTSL 3 BASIC29.63■■■□□ 2.33
ABCA9Q8IUA7 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC29.63■■■□□ 2.33
ABCA9Q8IUA7 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
ABCA9Q8IUA7 MYB-221ENST00000527615 2381 ntTSL 5 BASIC29.63■■■□□ 2.33
ABCA9Q8IUA7 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
ABCA9Q8IUA7 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC29.63■■■□□ 2.33
ABCA9Q8IUA7 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC29.63■■■□□ 2.33
ABCA9Q8IUA7 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC29.63■■■□□ 2.33
ABCA9Q8IUA7 AC106795.1-205ENST00000512851 1056 ntBASIC29.63■■■□□ 2.33
ABCA9Q8IUA7 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC29.63■■■□□ 2.33
ABCA9Q8IUA7 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC29.63■■■□□ 2.33
ABCA9Q8IUA7 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC29.63■■■□□ 2.33
ABCA9Q8IUA7 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC29.63■■■□□ 2.33
ABCA9Q8IUA7 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC29.63■■■□□ 2.33
ABCA9Q8IUA7 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
ABCA9Q8IUA7 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
ABCA9Q8IUA7 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC29.62■■■□□ 2.33
ABCA9Q8IUA7 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
ABCA9Q8IUA7 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
ABCA9Q8IUA7 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
ABCA9Q8IUA7 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
ABCA9Q8IUA7 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC29.62■■■□□ 2.33
ABCA9Q8IUA7 AC034232.1-201ENST00000506026 1064 ntBASIC29.62■■■□□ 2.33
ABCA9Q8IUA7 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
ABCA9Q8IUA7 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC29.62■■■□□ 2.33
ABCA9Q8IUA7 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC29.62■■■□□ 2.33
ABCA9Q8IUA7 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC29.62■■■□□ 2.33
ABCA9Q8IUA7 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
ABCA9Q8IUA7 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC29.62■■■□□ 2.33
ABCA9Q8IUA7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
ABCA9Q8IUA7 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
ABCA9Q8IUA7 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
ABCA9Q8IUA7 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
ABCA9Q8IUA7 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
ABCA9Q8IUA7 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
ABCA9Q8IUA7 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
ABCA9Q8IUA7 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC29.61■■■□□ 2.33
ABCA9Q8IUA7 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC29.61■■■□□ 2.33
ABCA9Q8IUA7 AP002414.4-201ENST00000589764 1148 ntBASIC29.61■■■□□ 2.33
ABCA9Q8IUA7 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC29.61■■■□□ 2.33
ABCA9Q8IUA7 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
ABCA9Q8IUA7 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC29.61■■■□□ 2.33
ABCA9Q8IUA7 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC29.61■■■□□ 2.33
ABCA9Q8IUA7 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms