Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTTNQ86VV8 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTTNQ86VV8 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTTNQ86VV8 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTTNQ86VV8 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.13■□□□□ 0.33
RTTNQ86VV8 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RTTNQ86VV8 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RTTNQ86VV8 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.12■□□□□ 0.33
RTTNQ86VV8 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTTNQ86VV8 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
RTTNQ86VV8 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTTNQ86VV8 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
RTTNQ86VV8 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
RTTNQ86VV8 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RTTNQ86VV8 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTTNQ86VV8 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.12■□□□□ 0.33
RTTNQ86VV8 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTTNQ86VV8 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
RTTNQ86VV8 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTTNQ86VV8 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RTTNQ86VV8 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTTNQ86VV8 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTTNQ86VV8 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTTNQ86VV8 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.12■□□□□ 0.33
RTTNQ86VV8 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.12■□□□□ 0.33
RTTNQ86VV8 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RTTNQ86VV8 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.12■□□□□ 0.33
RTTNQ86VV8 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.12■□□□□ 0.33
RTTNQ86VV8 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTTNQ86VV8 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RTTNQ86VV8 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.12■□□□□ 0.33
RTTNQ86VV8 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RTTNQ86VV8 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTTNQ86VV8 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.12■□□□□ 0.33
RTTNQ86VV8 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTTNQ86VV8 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RTTNQ86VV8 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTTNQ86VV8 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
RTTNQ86VV8 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTTNQ86VV8 AC009237.14-201ENST00000609975 1594 ntBASIC17.11■□□□□ 0.33
RTTNQ86VV8 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
RTTNQ86VV8 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.11■□□□□ 0.33
RTTNQ86VV8 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTTNQ86VV8 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RTTNQ86VV8 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
RTTNQ86VV8 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.11■□□□□ 0.33
RTTNQ86VV8 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RTTNQ86VV8 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.11■□□□□ 0.33
RTTNQ86VV8 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RTTNQ86VV8 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RTTNQ86VV8 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.11■□□□□ 0.33
RTTNQ86VV8 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.11■□□□□ 0.33
RTTNQ86VV8 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.11■□□□□ 0.33
RTTNQ86VV8 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.11■□□□□ 0.33
RTTNQ86VV8 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTTNQ86VV8 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTTNQ86VV8 AC116562.4-201ENST00000641316 2276 ntBASIC17.11■□□□□ 0.33
RTTNQ86VV8 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTTNQ86VV8 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RTTNQ86VV8 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RTTNQ86VV8 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.11■□□□□ 0.33
RTTNQ86VV8 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RTTNQ86VV8 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
RTTNQ86VV8 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.11■□□□□ 0.33
RTTNQ86VV8 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RTTNQ86VV8 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.1■□□□□ 0.33
RTTNQ86VV8 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RTTNQ86VV8 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RTTNQ86VV8 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RTTNQ86VV8 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.1■□□□□ 0.33
RTTNQ86VV8 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RTTNQ86VV8 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RTTNQ86VV8 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RTTNQ86VV8 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.1■□□□□ 0.33
RTTNQ86VV8 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RTTNQ86VV8 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.1■□□□□ 0.33
RTTNQ86VV8 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RTTNQ86VV8 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.1■□□□□ 0.33
RTTNQ86VV8 C1QBPP2-201ENST00000528754 825 ntBASIC17.1■□□□□ 0.33
RTTNQ86VV8 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.1■□□□□ 0.33
RTTNQ86VV8 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.1■□□□□ 0.33
RTTNQ86VV8 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.1■□□□□ 0.33
RTTNQ86VV8 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RTTNQ86VV8 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RTTNQ86VV8 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RTTNQ86VV8 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RTTNQ86VV8 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.1■□□□□ 0.33
RTTNQ86VV8 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RTTNQ86VV8 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RTTNQ86VV8 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.1■□□□□ 0.33
RTTNQ86VV8 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.1■□□□□ 0.33
RTTNQ86VV8 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
RTTNQ86VV8 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RTTNQ86VV8 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RTTNQ86VV8 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RTTNQ86VV8 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RTTNQ86VV8 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RTTNQ86VV8 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RTTNQ86VV8 RPPH1-201ENST00000516869 333 ntBASIC17.09■□□□□ 0.33
RTTNQ86VV8 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms