Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
DENND4AQ7Z401 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
DENND4AQ7Z401 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
DENND4AQ7Z401 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.06■□□□□ 0.8
DENND4AQ7Z401 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.06■□□□□ 0.8
DENND4AQ7Z401 LINC01465-201ENST00000408887 1940 ntBASIC20.06■□□□□ 0.8
DENND4AQ7Z401 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.05■□□□□ 0.8
DENND4AQ7Z401 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
DENND4AQ7Z401 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.05■□□□□ 0.8
DENND4AQ7Z401 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DENND4AQ7Z401 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DENND4AQ7Z401 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
DENND4AQ7Z401 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
DENND4AQ7Z401 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
DENND4AQ7Z401 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
DENND4AQ7Z401 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.05■□□□□ 0.8
DENND4AQ7Z401 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.05■□□□□ 0.8
DENND4AQ7Z401 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.05■□□□□ 0.8
DENND4AQ7Z401 AL031432.5-201ENST00000641059 760 ntBASIC20.05■□□□□ 0.8
DENND4AQ7Z401 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DENND4AQ7Z401 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
DENND4AQ7Z401 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
DENND4AQ7Z401 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DENND4AQ7Z401 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
DENND4AQ7Z401 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
DENND4AQ7Z401 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.05■□□□□ 0.8
DENND4AQ7Z401 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DENND4AQ7Z401 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
DENND4AQ7Z401 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
DENND4AQ7Z401 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
DENND4AQ7Z401 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
DENND4AQ7Z401 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.05■□□□□ 0.8
DENND4AQ7Z401 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.05■□□□□ 0.8
DENND4AQ7Z401 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
DENND4AQ7Z401 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
DENND4AQ7Z401 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
DENND4AQ7Z401 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DENND4AQ7Z401 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.04■□□□□ 0.8
DENND4AQ7Z401 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
DENND4AQ7Z401 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
DENND4AQ7Z401 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DENND4AQ7Z401 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.04■□□□□ 0.8
DENND4AQ7Z401 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DENND4AQ7Z401 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DENND4AQ7Z401 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
DENND4AQ7Z401 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.04■□□□□ 0.8
DENND4AQ7Z401 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
DENND4AQ7Z401 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.04■□□□□ 0.8
DENND4AQ7Z401 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
DENND4AQ7Z401 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
DENND4AQ7Z401 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DENND4AQ7Z401 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DENND4AQ7Z401 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
DENND4AQ7Z401 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DENND4AQ7Z401 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DENND4AQ7Z401 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
DENND4AQ7Z401 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
DENND4AQ7Z401 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
DENND4AQ7Z401 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
DENND4AQ7Z401 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.03■□□□□ 0.8
DENND4AQ7Z401 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.03■□□□□ 0.8
DENND4AQ7Z401 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
DENND4AQ7Z401 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
DENND4AQ7Z401 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DENND4AQ7Z401 KRT8P11-201ENST00000409686 1436 ntBASIC20.03■□□□□ 0.8
DENND4AQ7Z401 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
DENND4AQ7Z401 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
DENND4AQ7Z401 AL645929.1-201ENST00000420084 975 ntBASIC20.03■□□□□ 0.8
DENND4AQ7Z401 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.03■□□□□ 0.8
DENND4AQ7Z401 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.03■□□□□ 0.8
DENND4AQ7Z401 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
DENND4AQ7Z401 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DENND4AQ7Z401 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DENND4AQ7Z401 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DENND4AQ7Z401 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.02■□□□□ 0.8
DENND4AQ7Z401 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
DENND4AQ7Z401 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
DENND4AQ7Z401 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
DENND4AQ7Z401 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
DENND4AQ7Z401 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.02■□□□□ 0.8
DENND4AQ7Z401 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
DENND4AQ7Z401 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.02■□□□□ 0.8
DENND4AQ7Z401 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
DENND4AQ7Z401 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.02■□□□□ 0.8
DENND4AQ7Z401 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
DENND4AQ7Z401 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
DENND4AQ7Z401 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.02■□□□□ 0.79
DENND4AQ7Z401 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
DENND4AQ7Z401 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DENND4AQ7Z401 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DENND4AQ7Z401 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.01■□□□□ 0.79
DENND4AQ7Z401 AC246785.2-201ENST00000432512 513 ntBASIC20.01■□□□□ 0.79
DENND4AQ7Z401 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.01■□□□□ 0.79
DENND4AQ7Z401 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
DENND4AQ7Z401 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
DENND4AQ7Z401 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
DENND4AQ7Z401 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.01■□□□□ 0.79
DENND4AQ7Z401 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.01■□□□□ 0.79
DENND4AQ7Z401 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.01■□□□□ 0.79
DENND4AQ7Z401 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms