Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 MIR4497-201ENST00000583208 89 ntBASIC12.82□□□□□ -0.36
SCXQ7RTU7 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC12.82□□□□□ -0.36
SCXQ7RTU7 Z99916.2-201ENST00000604037 246 ntBASIC12.82□□□□□ -0.36
SCXQ7RTU7 MTDHP1-201ENST00000605323 784 ntBASIC12.82□□□□□ -0.36
SCXQ7RTU7 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SCXQ7RTU7 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SCXQ7RTU7 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC12.82□□□□□ -0.36
SCXQ7RTU7 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SCXQ7RTU7 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
SCXQ7RTU7 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC12.82□□□□□ -0.36
SCXQ7RTU7 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SCXQ7RTU7 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SCXQ7RTU7 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SCXQ7RTU7 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC12.82□□□□□ -0.36
SCXQ7RTU7 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SCXQ7RTU7 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SCXQ7RTU7 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC12.82□□□□□ -0.36
SCXQ7RTU7 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
SCXQ7RTU7 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SCXQ7RTU7 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
SCXQ7RTU7 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SCXQ7RTU7 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
SCXQ7RTU7 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC12.81□□□□□ -0.36
SCXQ7RTU7 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SCXQ7RTU7 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC12.81□□□□□ -0.36
SCXQ7RTU7 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SCXQ7RTU7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SCXQ7RTU7 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SCXQ7RTU7 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SCXQ7RTU7 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SCXQ7RTU7 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SCXQ7RTU7 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SCXQ7RTU7 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SCXQ7RTU7 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SCXQ7RTU7 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
SCXQ7RTU7 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC12.81□□□□□ -0.36
SCXQ7RTU7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SCXQ7RTU7 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SCXQ7RTU7 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SCXQ7RTU7 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SCXQ7RTU7 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC12.81□□□□□ -0.36
SCXQ7RTU7 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SCXQ7RTU7 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SCXQ7RTU7 LY6E-205ENST00000519611 635 ntTSL 3 BASIC12.81□□□□□ -0.36
SCXQ7RTU7 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
SCXQ7RTU7 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC12.81□□□□□ -0.36
SCXQ7RTU7 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC12.81□□□□□ -0.36
SCXQ7RTU7 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SCXQ7RTU7 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SCXQ7RTU7 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
SCXQ7RTU7 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
SCXQ7RTU7 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SCXQ7RTU7 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SCXQ7RTU7 BCL2-203ENST00000589955 5011 ntBASIC12.81□□□□□ -0.36
SCXQ7RTU7 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SCXQ7RTU7 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC12.81□□□□□ -0.36
SCXQ7RTU7 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC12.81□□□□□ -0.36
SCXQ7RTU7 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC12.81□□□□□ -0.36
SCXQ7RTU7 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC12.81□□□□□ -0.36
SCXQ7RTU7 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC12.81□□□□□ -0.36
SCXQ7RTU7 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SCXQ7RTU7 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SCXQ7RTU7 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SCXQ7RTU7 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SCXQ7RTU7 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SCXQ7RTU7 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
SCXQ7RTU7 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SCXQ7RTU7 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SCXQ7RTU7 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SCXQ7RTU7 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SCXQ7RTU7 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SCXQ7RTU7 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SCXQ7RTU7 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SCXQ7RTU7 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SCXQ7RTU7 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SCXQ7RTU7 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SCXQ7RTU7 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
SCXQ7RTU7 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
SCXQ7RTU7 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC12.8□□□□□ -0.36
SCXQ7RTU7 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SCXQ7RTU7 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SCXQ7RTU7 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SCXQ7RTU7 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC12.8□□□□□ -0.36
SCXQ7RTU7 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SCXQ7RTU7 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SCXQ7RTU7 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SCXQ7RTU7 MDFI-202ENST00000373050 809 ntTSL 2 BASIC12.8□□□□□ -0.36
SCXQ7RTU7 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC12.8□□□□□ -0.36
SCXQ7RTU7 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SCXQ7RTU7 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SCXQ7RTU7 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC12.8□□□□□ -0.36
SCXQ7RTU7 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC12.8□□□□□ -0.36
SCXQ7RTU7 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC12.8□□□□□ -0.36
SCXQ7RTU7 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC12.8□□□□□ -0.36
SCXQ7RTU7 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC12.8□□□□□ -0.36
SCXQ7RTU7 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC12.8□□□□□ -0.36
SCXQ7RTU7 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
SCXQ7RTU7 AC124016.1-201ENST00000609552 612 ntBASIC12.8□□□□□ -0.36
SCXQ7RTU7 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SCXQ7RTU7 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms