Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
CCDC62Q6P9F0 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC62Q6P9F0 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC62Q6P9F0 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
CCDC62Q6P9F0 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC21.85■■□□□ 1.09
CCDC62Q6P9F0 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.85■■□□□ 1.09
CCDC62Q6P9F0 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
CCDC62Q6P9F0 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.85■■□□□ 1.09
CCDC62Q6P9F0 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.85■■□□□ 1.09
CCDC62Q6P9F0 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC62Q6P9F0 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
CCDC62Q6P9F0 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC62Q6P9F0 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
CCDC62Q6P9F0 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC62Q6P9F0 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC62Q6P9F0 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.84■■□□□ 1.09
CCDC62Q6P9F0 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC62Q6P9F0 LINC01465-201ENST00000408887 1940 ntBASIC21.84■■□□□ 1.09
CCDC62Q6P9F0 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.84■■□□□ 1.09
CCDC62Q6P9F0 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.84■■□□□ 1.09
CCDC62Q6P9F0 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.84■■□□□ 1.09
CCDC62Q6P9F0 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC62Q6P9F0 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC62Q6P9F0 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
CCDC62Q6P9F0 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.84■■□□□ 1.09
CCDC62Q6P9F0 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC62Q6P9F0 HIST1H2APS4-201ENST00000362070 348 ntBASIC21.84■■□□□ 1.09
CCDC62Q6P9F0 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC62Q6P9F0 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC62Q6P9F0 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21.84■■□□□ 1.09
CCDC62Q6P9F0 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC21.84■■□□□ 1.09
CCDC62Q6P9F0 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC21.84■■□□□ 1.09
CCDC62Q6P9F0 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
CCDC62Q6P9F0 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.84■■□□□ 1.09
CCDC62Q6P9F0 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.84■■□□□ 1.09
CCDC62Q6P9F0 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC62Q6P9F0 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC62Q6P9F0 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC62Q6P9F0 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.84■■□□□ 1.09
CCDC62Q6P9F0 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
CCDC62Q6P9F0 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC62Q6P9F0 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC62Q6P9F0 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC62Q6P9F0 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.84■■□□□ 1.09
CCDC62Q6P9F0 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC62Q6P9F0 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC62Q6P9F0 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC62Q6P9F0 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.83■■□□□ 1.09
CCDC62Q6P9F0 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC62Q6P9F0 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC62Q6P9F0 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC62Q6P9F0 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC62Q6P9F0 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC62Q6P9F0 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.83■■□□□ 1.09
CCDC62Q6P9F0 LIN28AP1-201ENST00000429574 405 ntBASIC21.83■■□□□ 1.09
CCDC62Q6P9F0 SLC25A1P2-201ENST00000430693 912 ntBASIC21.83■■□□□ 1.09
CCDC62Q6P9F0 AL023803.3-201ENST00000615559 522 ntBASIC21.83■■□□□ 1.09
CCDC62Q6P9F0 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
CCDC62Q6P9F0 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.83■■□□□ 1.08
CCDC62Q6P9F0 GABARAPL3-202ENST00000624044 1851 ntBASIC21.83■■□□□ 1.08
CCDC62Q6P9F0 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CCDC62Q6P9F0 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CCDC62Q6P9F0 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.08
CCDC62Q6P9F0 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
CCDC62Q6P9F0 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.08
CCDC62Q6P9F0 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC62Q6P9F0 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC62Q6P9F0 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC62Q6P9F0 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CCDC62Q6P9F0 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.82■■□□□ 1.08
CCDC62Q6P9F0 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC62Q6P9F0 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.82■■□□□ 1.08
CCDC62Q6P9F0 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.82■■□□□ 1.08
CCDC62Q6P9F0 KRT8P41-201ENST00000533985 1514 ntBASIC21.82■■□□□ 1.08
CCDC62Q6P9F0 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CCDC62Q6P9F0 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC62Q6P9F0 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC62Q6P9F0 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC62Q6P9F0 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.82■■□□□ 1.08
CCDC62Q6P9F0 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.82■■□□□ 1.08
CCDC62Q6P9F0 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC21.82■■□□□ 1.08
CCDC62Q6P9F0 LTBR-211ENST00000543190 785 ntTSL 3 BASIC21.82■■□□□ 1.08
CCDC62Q6P9F0 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.82■■□□□ 1.08
CCDC62Q6P9F0 AC116562.4-202ENST00000641738 218 ntBASIC21.82■■□□□ 1.08
CCDC62Q6P9F0 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.82■■□□□ 1.08
CCDC62Q6P9F0 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC62Q6P9F0 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC62Q6P9F0 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC62Q6P9F0 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.82■■□□□ 1.08
CCDC62Q6P9F0 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CCDC62Q6P9F0 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC62Q6P9F0 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC62Q6P9F0 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC62Q6P9F0 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC62Q6P9F0 AL391422.3-201ENST00000603791 2761 ntBASIC21.81■■□□□ 1.08
CCDC62Q6P9F0 HMGA1P5-201ENST00000412453 271 ntBASIC21.81■■□□□ 1.08
CCDC62Q6P9F0 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC21.81■■□□□ 1.08
CCDC62Q6P9F0 ATP5G1P1-201ENST00000448724 379 ntBASIC21.81■■□□□ 1.08
CCDC62Q6P9F0 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.81■■□□□ 1.08
CCDC62Q6P9F0 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms