Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
KRT40Q6A162 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
KRT40Q6A162 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC22.5■■□□□ 1.19
KRT40Q6A162 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC22.5■■□□□ 1.19
KRT40Q6A162 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC22.5■■□□□ 1.19
KRT40Q6A162 AL032819.2-201ENST00000624543 2162 ntBASIC22.5■■□□□ 1.19
KRT40Q6A162 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
KRT40Q6A162 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC22.5■■□□□ 1.19
KRT40Q6A162 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
KRT40Q6A162 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC22.5■■□□□ 1.19
KRT40Q6A162 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
KRT40Q6A162 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
KRT40Q6A162 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
KRT40Q6A162 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
KRT40Q6A162 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
KRT40Q6A162 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC22.49■■□□□ 1.19
KRT40Q6A162 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
KRT40Q6A162 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC22.49■■□□□ 1.19
KRT40Q6A162 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
KRT40Q6A162 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
KRT40Q6A162 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
KRT40Q6A162 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
KRT40Q6A162 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
KRT40Q6A162 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC22.49■■□□□ 1.19
KRT40Q6A162 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC22.49■■□□□ 1.19
KRT40Q6A162 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
KRT40Q6A162 Six3os1_6.1-201ENST00000620790 196 ntBASIC22.49■■□□□ 1.19
KRT40Q6A162 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
KRT40Q6A162 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
KRT40Q6A162 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC22.49■■□□□ 1.19
KRT40Q6A162 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
KRT40Q6A162 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
KRT40Q6A162 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC22.49■■□□□ 1.19
KRT40Q6A162 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC22.49■■□□□ 1.19
KRT40Q6A162 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC22.49■■□□□ 1.19
KRT40Q6A162 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
KRT40Q6A162 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
KRT40Q6A162 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
KRT40Q6A162 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
KRT40Q6A162 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
KRT40Q6A162 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC22.48■■□□□ 1.19
KRT40Q6A162 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC22.48■■□□□ 1.19
KRT40Q6A162 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
KRT40Q6A162 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC22.48■■□□□ 1.19
KRT40Q6A162 KRT18P16-201ENST00000510337 1294 ntBASIC22.48■■□□□ 1.19
KRT40Q6A162 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC22.48■■□□□ 1.19
KRT40Q6A162 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC22.48■■□□□ 1.19
KRT40Q6A162 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
KRT40Q6A162 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
KRT40Q6A162 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
KRT40Q6A162 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
KRT40Q6A162 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
KRT40Q6A162 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
KRT40Q6A162 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC22.48■■□□□ 1.19
KRT40Q6A162 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
KRT40Q6A162 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
KRT40Q6A162 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
KRT40Q6A162 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
KRT40Q6A162 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
KRT40Q6A162 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
KRT40Q6A162 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
KRT40Q6A162 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC22.47■■□□□ 1.19
KRT40Q6A162 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
KRT40Q6A162 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
KRT40Q6A162 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
KRT40Q6A162 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
KRT40Q6A162 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
KRT40Q6A162 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC22.47■■□□□ 1.19
KRT40Q6A162 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC22.47■■□□□ 1.19
KRT40Q6A162 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
KRT40Q6A162 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC22.47■■□□□ 1.19
KRT40Q6A162 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
KRT40Q6A162 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC22.47■■□□□ 1.19
KRT40Q6A162 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC22.47■■□□□ 1.19
KRT40Q6A162 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC22.47■■□□□ 1.19
KRT40Q6A162 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
KRT40Q6A162 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
KRT40Q6A162 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC22.47■■□□□ 1.19
KRT40Q6A162 AC069544.1-201ENST00000609399 999 ntBASIC22.47■■□□□ 1.19
KRT40Q6A162 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
KRT40Q6A162 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
KRT40Q6A162 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC22.47■■□□□ 1.19
KRT40Q6A162 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
KRT40Q6A162 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC22.46■■□□□ 1.19
KRT40Q6A162 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
KRT40Q6A162 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
KRT40Q6A162 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
KRT40Q6A162 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
KRT40Q6A162 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
KRT40Q6A162 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC22.46■■□□□ 1.19
KRT40Q6A162 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
KRT40Q6A162 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
KRT40Q6A162 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
KRT40Q6A162 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
KRT40Q6A162 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
KRT40Q6A162 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC22.46■■□□□ 1.19
KRT40Q6A162 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC22.46■■□□□ 1.19
KRT40Q6A162 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC22.46■■□□□ 1.19
KRT40Q6A162 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC22.46■■□□□ 1.19
KRT40Q6A162 RN7SL471P-201ENST00000580476 299 ntBASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms