Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
LRRK2Q5S007 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.91■□□□□ 0.3
LRRK2Q5S007 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRK2Q5S007 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
LRRK2Q5S007 AL353801.3-201ENST00000609898 542 ntBASIC16.91■□□□□ 0.3
LRRK2Q5S007 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC16.91■□□□□ 0.3
LRRK2Q5S007 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRK2Q5S007 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.9■□□□□ 0.3
LRRK2Q5S007 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC16.9■□□□□ 0.3
LRRK2Q5S007 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRK2Q5S007 AC093525.10-201ENST00000625130 1569 ntBASIC16.9■□□□□ 0.3
LRRK2Q5S007 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRRK2Q5S007 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRK2Q5S007 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.9■□□□□ 0.3
LRRK2Q5S007 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
LRRK2Q5S007 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.9■□□□□ 0.3
LRRK2Q5S007 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
LRRK2Q5S007 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC16.9■□□□□ 0.3
LRRK2Q5S007 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC16.9■□□□□ 0.3
LRRK2Q5S007 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRRK2Q5S007 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRK2Q5S007 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRRK2Q5S007 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.9■□□□□ 0.3
LRRK2Q5S007 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC16.9■□□□□ 0.3
LRRK2Q5S007 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.9■□□□□ 0.3
LRRK2Q5S007 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRRK2Q5S007 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRK2Q5S007 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
LRRK2Q5S007 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.9■□□□□ 0.3
LRRK2Q5S007 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.9■□□□□ 0.3
LRRK2Q5S007 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRRK2Q5S007 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
LRRK2Q5S007 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
LRRK2Q5S007 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.89■□□□□ 0.3
LRRK2Q5S007 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
LRRK2Q5S007 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRK2Q5S007 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.89■□□□□ 0.29
LRRK2Q5S007 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC16.89■□□□□ 0.29
LRRK2Q5S007 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRRK2Q5S007 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.89■□□□□ 0.29
LRRK2Q5S007 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRRK2Q5S007 AL031284.1-201ENST00000419297 478 ntBASIC16.89■□□□□ 0.29
LRRK2Q5S007 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRK2Q5S007 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.89■□□□□ 0.29
LRRK2Q5S007 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRK2Q5S007 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRK2Q5S007 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRK2Q5S007 ECEL1P1-201ENST00000373592 1742 ntBASIC16.89■□□□□ 0.29
LRRK2Q5S007 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRK2Q5S007 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRK2Q5S007 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
LRRK2Q5S007 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
LRRK2Q5S007 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRRK2Q5S007 AL035633.1-201ENST00000406139 838 ntBASIC16.89■□□□□ 0.29
LRRK2Q5S007 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.89■□□□□ 0.29
LRRK2Q5S007 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.89■□□□□ 0.29
LRRK2Q5S007 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.89■□□□□ 0.29
LRRK2Q5S007 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.89■□□□□ 0.29
LRRK2Q5S007 PGAM5P1-201ENST00000518923 814 ntBASIC16.89■□□□□ 0.29
LRRK2Q5S007 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.89■□□□□ 0.29
LRRK2Q5S007 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRRK2Q5S007 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRK2Q5S007 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.88■□□□□ 0.29
LRRK2Q5S007 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRK2Q5S007 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRRK2Q5S007 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRRK2Q5S007 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRRK2Q5S007 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
LRRK2Q5S007 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.88■□□□□ 0.29
LRRK2Q5S007 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.88■□□□□ 0.29
LRRK2Q5S007 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRK2Q5S007 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
LRRK2Q5S007 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.88■□□□□ 0.29
LRRK2Q5S007 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRK2Q5S007 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC16.88■□□□□ 0.29
LRRK2Q5S007 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRK2Q5S007 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRK2Q5S007 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRK2Q5S007 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRK2Q5S007 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRRK2Q5S007 TOB2P1-201ENST00000469761 992 ntBASIC16.88■□□□□ 0.29
LRRK2Q5S007 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRRK2Q5S007 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.88■□□□□ 0.29
LRRK2Q5S007 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRK2Q5S007 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRK2Q5S007 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
LRRK2Q5S007 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRK2Q5S007 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.87■□□□□ 0.29
LRRK2Q5S007 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRK2Q5S007 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRK2Q5S007 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.87■□□□□ 0.29
LRRK2Q5S007 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
LRRK2Q5S007 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.87■□□□□ 0.29
LRRK2Q5S007 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRK2Q5S007 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRK2Q5S007 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRK2Q5S007 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LRRK2Q5S007 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
LRRK2Q5S007 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRK2Q5S007 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms