Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.65■□□□□ 0.58
PDCD4Q53EL6 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.65■□□□□ 0.58
PDCD4Q53EL6 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDCD4Q53EL6 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDCD4Q53EL6 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDCD4Q53EL6 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.65■□□□□ 0.58
PDCD4Q53EL6 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.65■□□□□ 0.58
PDCD4Q53EL6 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDCD4Q53EL6 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.65■□□□□ 0.58
PDCD4Q53EL6 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDCD4Q53EL6 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.65■□□□□ 0.58
PDCD4Q53EL6 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.65■□□□□ 0.58
PDCD4Q53EL6 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.65■□□□□ 0.58
PDCD4Q53EL6 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDCD4Q53EL6 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDCD4Q53EL6 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDCD4Q53EL6 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.65■□□□□ 0.58
PDCD4Q53EL6 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDCD4Q53EL6 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDCD4Q53EL6 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PDCD4Q53EL6 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDCD4Q53EL6 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.64■□□□□ 0.58
PDCD4Q53EL6 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
PDCD4Q53EL6 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PDCD4Q53EL6 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
PDCD4Q53EL6 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PDCD4Q53EL6 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.64■□□□□ 0.58
PDCD4Q53EL6 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.64■□□□□ 0.57
PDCD4Q53EL6 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PDCD4Q53EL6 ZNF815P-204ENST00000434898 1737 ntBASIC18.64■□□□□ 0.57
PDCD4Q53EL6 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.64■□□□□ 0.57
PDCD4Q53EL6 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDCD4Q53EL6 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PDCD4Q53EL6 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.64■□□□□ 0.57
PDCD4Q53EL6 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.64■□□□□ 0.57
PDCD4Q53EL6 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.64■□□□□ 0.57
PDCD4Q53EL6 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.64■□□□□ 0.57
PDCD4Q53EL6 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PDCD4Q53EL6 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.64■□□□□ 0.57
PDCD4Q53EL6 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PDCD4Q53EL6 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PDCD4Q53EL6 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDCD4Q53EL6 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDCD4Q53EL6 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PDCD4Q53EL6 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDCD4Q53EL6 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.64■□□□□ 0.57
PDCD4Q53EL6 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PDCD4Q53EL6 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PDCD4Q53EL6 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDCD4Q53EL6 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDCD4Q53EL6 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PDCD4Q53EL6 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDCD4Q53EL6 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PDCD4Q53EL6 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDCD4Q53EL6 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PDCD4Q53EL6 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PDCD4Q53EL6 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDCD4Q53EL6 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.63■□□□□ 0.57
PDCD4Q53EL6 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDCD4Q53EL6 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDCD4Q53EL6 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PDCD4Q53EL6 LSM12P1-201ENST00000411836 588 ntBASIC18.63■□□□□ 0.57
PDCD4Q53EL6 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.63■□□□□ 0.57
PDCD4Q53EL6 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.63■□□□□ 0.57
PDCD4Q53EL6 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.63■□□□□ 0.57
PDCD4Q53EL6 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.63■□□□□ 0.57
PDCD4Q53EL6 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.63■□□□□ 0.57
PDCD4Q53EL6 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDCD4Q53EL6 AC120498.9-201ENST00000339021 3867 ntBASIC18.63■□□□□ 0.57
PDCD4Q53EL6 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDCD4Q53EL6 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDCD4Q53EL6 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.62■□□□□ 0.57
PDCD4Q53EL6 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PDCD4Q53EL6 AC006333.2-201ENST00000607957 2099 ntBASIC18.62■□□□□ 0.57
PDCD4Q53EL6 NOC2LP1-202ENST00000452600 2235 ntBASIC18.62■□□□□ 0.57
PDCD4Q53EL6 AL049812.1-201ENST00000432563 2267 ntBASIC18.62■□□□□ 0.57
PDCD4Q53EL6 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
PDCD4Q53EL6 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PDCD4Q53EL6 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
PDCD4Q53EL6 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PDCD4Q53EL6 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.62■□□□□ 0.57
PDCD4Q53EL6 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PDCD4Q53EL6 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.62■□□□□ 0.57
PDCD4Q53EL6 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PDCD4Q53EL6 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDCD4Q53EL6 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDCD4Q53EL6 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDCD4Q53EL6 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDCD4Q53EL6 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDCD4Q53EL6 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDCD4Q53EL6 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDCD4Q53EL6 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.62■□□□□ 0.57
PDCD4Q53EL6 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PDCD4Q53EL6 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.62■□□□□ 0.57
PDCD4Q53EL6 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDCD4Q53EL6 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PDCD4Q53EL6 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDCD4Q53EL6 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDCD4Q53EL6 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDCD4Q53EL6 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms