Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM71Q2Q1W2 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM71Q2Q1W2 AL031432.5-201ENST00000641059 760 ntBASIC21.23■□□□□ 0.99
TRIM71Q2Q1W2 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.23■□□□□ 0.99
TRIM71Q2Q1W2 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
TRIM71Q2Q1W2 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM71Q2Q1W2 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.23■□□□□ 0.99
TRIM71Q2Q1W2 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM71Q2Q1W2 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
TRIM71Q2Q1W2 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM71Q2Q1W2 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM71Q2Q1W2 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM71Q2Q1W2 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM71Q2Q1W2 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM71Q2Q1W2 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.22■□□□□ 0.99
TRIM71Q2Q1W2 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM71Q2Q1W2 KRT8P45-201ENST00000414328 1447 ntBASIC21.22■□□□□ 0.99
TRIM71Q2Q1W2 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM71Q2Q1W2 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.22■□□□□ 0.99
TRIM71Q2Q1W2 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
TRIM71Q2Q1W2 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM71Q2Q1W2 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM71Q2Q1W2 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
TRIM71Q2Q1W2 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM71Q2Q1W2 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM71Q2Q1W2 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.22■□□□□ 0.99
TRIM71Q2Q1W2 KRT18P38-201ENST00000449496 1282 ntBASIC21.22■□□□□ 0.99
TRIM71Q2Q1W2 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.22■□□□□ 0.99
TRIM71Q2Q1W2 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.22■□□□□ 0.99
TRIM71Q2Q1W2 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.22■□□□□ 0.99
TRIM71Q2Q1W2 DBP-204ENST00000599385 709 ntTSL 3 BASIC21.22■□□□□ 0.99
TRIM71Q2Q1W2 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC21.22■□□□□ 0.99
TRIM71Q2Q1W2 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM71Q2Q1W2 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.22■□□□□ 0.99
TRIM71Q2Q1W2 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.22■□□□□ 0.99
TRIM71Q2Q1W2 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.22■□□□□ 0.99
TRIM71Q2Q1W2 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM71Q2Q1W2 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM71Q2Q1W2 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM71Q2Q1W2 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.22■□□□□ 0.99
TRIM71Q2Q1W2 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
TRIM71Q2Q1W2 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.21■□□□□ 0.99
TRIM71Q2Q1W2 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM71Q2Q1W2 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM71Q2Q1W2 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM71Q2Q1W2 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM71Q2Q1W2 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.21■□□□□ 0.99
TRIM71Q2Q1W2 PCED1CP-201ENST00000419887 785 ntBASIC21.21■□□□□ 0.99
TRIM71Q2Q1W2 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC21.21■□□□□ 0.99
TRIM71Q2Q1W2 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.21■□□□□ 0.99
TRIM71Q2Q1W2 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.21■□□□□ 0.99
TRIM71Q2Q1W2 AC008622.2-201ENST00000617006 1229 ntBASIC21.21■□□□□ 0.99
TRIM71Q2Q1W2 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM71Q2Q1W2 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
TRIM71Q2Q1W2 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM71Q2Q1W2 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.21■□□□□ 0.99
TRIM71Q2Q1W2 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM71Q2Q1W2 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM71Q2Q1W2 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
TRIM71Q2Q1W2 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.21■□□□□ 0.99
TRIM71Q2Q1W2 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM71Q2Q1W2 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM71Q2Q1W2 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
TRIM71Q2Q1W2 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM71Q2Q1W2 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC21.2■□□□□ 0.98
TRIM71Q2Q1W2 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM71Q2Q1W2 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.2■□□□□ 0.98
TRIM71Q2Q1W2 AL359075.1-203ENST00000462729 1002 ntBASIC21.2■□□□□ 0.98
TRIM71Q2Q1W2 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.2■□□□□ 0.98
TRIM71Q2Q1W2 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.2■□□□□ 0.98
TRIM71Q2Q1W2 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.2■□□□□ 0.98
TRIM71Q2Q1W2 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.2■□□□□ 0.98
TRIM71Q2Q1W2 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.2■□□□□ 0.98
TRIM71Q2Q1W2 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.2■□□□□ 0.98
TRIM71Q2Q1W2 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
TRIM71Q2Q1W2 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
TRIM71Q2Q1W2 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM71Q2Q1W2 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM71Q2Q1W2 KRT8P11-201ENST00000409686 1436 ntBASIC21.2■□□□□ 0.98
TRIM71Q2Q1W2 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM71Q2Q1W2 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM71Q2Q1W2 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
TRIM71Q2Q1W2 AC009237.14-201ENST00000609975 1594 ntBASIC21.19■□□□□ 0.98
TRIM71Q2Q1W2 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
TRIM71Q2Q1W2 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
TRIM71Q2Q1W2 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM71Q2Q1W2 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
TRIM71Q2Q1W2 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIM71Q2Q1W2 PRSS44-201ENST00000515154 1146 ntBASIC21.19■□□□□ 0.98
TRIM71Q2Q1W2 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIM71Q2Q1W2 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIM71Q2Q1W2 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
TRIM71Q2Q1W2 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIM71Q2Q1W2 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM71Q2Q1W2 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIM71Q2Q1W2 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM71Q2Q1W2 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIM71Q2Q1W2 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM71Q2Q1W2 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
TRIM71Q2Q1W2 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms