Protein–RNA interactions for Protein: Q12805

EFEMP1, EGF-containing fibulin-like extracellular matrix protein 1, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1Q12805 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.22■□□□□ 0.83
EFEMP1Q12805 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
EFEMP1Q12805 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
EFEMP1Q12805 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.22■□□□□ 0.83
EFEMP1Q12805 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
EFEMP1Q12805 RBM17P1-201ENST00000453646 1190 ntBASIC20.22■□□□□ 0.83
EFEMP1Q12805 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
EFEMP1Q12805 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.22■□□□□ 0.83
EFEMP1Q12805 AC116562.2-201ENST00000507042 360 ntBASIC20.22■□□□□ 0.83
EFEMP1Q12805 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
EFEMP1Q12805 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.22■□□□□ 0.83
EFEMP1Q12805 AC026271.3-201ENST00000571884 352 ntBASIC20.22■□□□□ 0.83
EFEMP1Q12805 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.22■□□□□ 0.83
EFEMP1Q12805 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
EFEMP1Q12805 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
EFEMP1Q12805 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
EFEMP1Q12805 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.22■□□□□ 0.83
EFEMP1Q12805 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
EFEMP1Q12805 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.22■□□□□ 0.83
EFEMP1Q12805 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
EFEMP1Q12805 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
EFEMP1Q12805 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
EFEMP1Q12805 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
EFEMP1Q12805 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
EFEMP1Q12805 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
EFEMP1Q12805 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
EFEMP1Q12805 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.21■□□□□ 0.83
EFEMP1Q12805 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
EFEMP1Q12805 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.21■□□□□ 0.83
EFEMP1Q12805 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
EFEMP1Q12805 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.21■□□□□ 0.83
EFEMP1Q12805 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.21■□□□□ 0.83
EFEMP1Q12805 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
EFEMP1Q12805 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.21■□□□□ 0.83
EFEMP1Q12805 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
EFEMP1Q12805 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
EFEMP1Q12805 MIR6786-201ENST00000616843 113 ntBASIC20.21■□□□□ 0.83
EFEMP1Q12805 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
EFEMP1Q12805 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
EFEMP1Q12805 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
EFEMP1Q12805 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
EFEMP1Q12805 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
EFEMP1Q12805 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
EFEMP1Q12805 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
EFEMP1Q12805 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
EFEMP1Q12805 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
EFEMP1Q12805 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
EFEMP1Q12805 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
EFEMP1Q12805 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.2■□□□□ 0.82
EFEMP1Q12805 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
EFEMP1Q12805 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.2■□□□□ 0.82
EFEMP1Q12805 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
EFEMP1Q12805 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
EFEMP1Q12805 UNC93B2-201ENST00000285383 730 ntBASIC20.2■□□□□ 0.82
EFEMP1Q12805 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
EFEMP1Q12805 MESTP1-201ENST00000404287 994 ntBASIC20.2■□□□□ 0.82
EFEMP1Q12805 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.2■□□□□ 0.82
EFEMP1Q12805 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
EFEMP1Q12805 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.2■□□□□ 0.82
EFEMP1Q12805 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.2■□□□□ 0.82
EFEMP1Q12805 B3GAT3P1-201ENST00000471720 806 ntBASIC20.2■□□□□ 0.82
EFEMP1Q12805 AC011506.1-201ENST00000474329 610 ntBASIC20.2■□□□□ 0.82
EFEMP1Q12805 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
EFEMP1Q12805 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.2■□□□□ 0.82
EFEMP1Q12805 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
EFEMP1Q12805 AP000525.1-201ENST00000608286 694 ntBASIC20.2■□□□□ 0.82
EFEMP1Q12805 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
EFEMP1Q12805 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.2■□□□□ 0.82
EFEMP1Q12805 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
EFEMP1Q12805 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
EFEMP1Q12805 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
EFEMP1Q12805 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.19■□□□□ 0.82
EFEMP1Q12805 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.19■□□□□ 0.82
EFEMP1Q12805 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
EFEMP1Q12805 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
EFEMP1Q12805 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
EFEMP1Q12805 AC079598.2-202ENST00000546624 1451 ntBASIC20.19■□□□□ 0.82
EFEMP1Q12805 FSCN1P1-201ENST00000568912 1481 ntBASIC20.19■□□□□ 0.82
EFEMP1Q12805 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
EFEMP1Q12805 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
EFEMP1Q12805 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
EFEMP1Q12805 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
EFEMP1Q12805 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
EFEMP1Q12805 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
EFEMP1Q12805 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
EFEMP1Q12805 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
EFEMP1Q12805 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.19■□□□□ 0.82
EFEMP1Q12805 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.19■□□□□ 0.82
EFEMP1Q12805 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.19■□□□□ 0.82
EFEMP1Q12805 AL160286.2-201ENST00000567150 934 ntBASIC20.19■□□□□ 0.82
EFEMP1Q12805 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.19■□□□□ 0.82
EFEMP1Q12805 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.19■□□□□ 0.82
EFEMP1Q12805 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.19■□□□□ 0.82
EFEMP1Q12805 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
EFEMP1Q12805 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
EFEMP1Q12805 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.19■□□□□ 0.82
EFEMP1Q12805 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
EFEMP1Q12805 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
EFEMP1Q12805 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.19■□□□□ 0.82
EFEMP1Q12805 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms