Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.59■□□□□ 0.73
AP1S1P61966 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.59■□□□□ 0.73
AP1S1P61966 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.59■□□□□ 0.73
AP1S1P61966 AC131212.4-201ENST00000623606 975 ntBASIC19.59■□□□□ 0.73
AP1S1P61966 CR392000.1-201ENST00000624770 1228 ntBASIC19.59■□□□□ 0.73
AP1S1P61966 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.59■□□□□ 0.73
AP1S1P61966 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.59■□□□□ 0.73
AP1S1P61966 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.59■□□□□ 0.73
AP1S1P61966 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
AP1S1P61966 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.59■□□□□ 0.73
AP1S1P61966 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
AP1S1P61966 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.59■□□□□ 0.73
AP1S1P61966 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
AP1S1P61966 ZNF815P-204ENST00000434898 1737 ntBASIC19.59■□□□□ 0.73
AP1S1P61966 AFG3L1P-217ENST00000557444 2447 ntBASIC19.59■□□□□ 0.73
AP1S1P61966 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
AP1S1P61966 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
AP1S1P61966 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
AP1S1P61966 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
AP1S1P61966 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.58■□□□□ 0.73
AP1S1P61966 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
AP1S1P61966 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
AP1S1P61966 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
AP1S1P61966 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.58■□□□□ 0.72
AP1S1P61966 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.58■□□□□ 0.72
AP1S1P61966 AC004980.1-204ENST00000429707 299 ntBASIC19.58■□□□□ 0.72
AP1S1P61966 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.58■□□□□ 0.72
AP1S1P61966 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.58■□□□□ 0.72
AP1S1P61966 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
AP1S1P61966 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
AP1S1P61966 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
AP1S1P61966 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.58■□□□□ 0.72
AP1S1P61966 AL031985.4-201ENST00000642138 673 ntBASIC19.58■□□□□ 0.72
AP1S1P61966 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
AP1S1P61966 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
AP1S1P61966 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
AP1S1P61966 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
AP1S1P61966 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.58■□□□□ 0.72
AP1S1P61966 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
AP1S1P61966 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
AP1S1P61966 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP1S1P61966 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP1S1P61966 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP1S1P61966 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
AP1S1P61966 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP1S1P61966 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP1S1P61966 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP1S1P61966 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP1S1P61966 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
AP1S1P61966 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.57■□□□□ 0.72
AP1S1P61966 AL160286.2-201ENST00000567150 934 ntBASIC19.57■□□□□ 0.72
AP1S1P61966 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.57■□□□□ 0.72
AP1S1P61966 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.57■□□□□ 0.72
AP1S1P61966 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP1S1P61966 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
AP1S1P61966 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.57■□□□□ 0.72
AP1S1P61966 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP1S1P61966 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP1S1P61966 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.56■□□□□ 0.72
AP1S1P61966 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP1S1P61966 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.56■□□□□ 0.72
AP1S1P61966 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP1S1P61966 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP1S1P61966 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
AP1S1P61966 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
AP1S1P61966 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.56■□□□□ 0.72
AP1S1P61966 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
AP1S1P61966 SNORA78-201ENST00000459373 127 ntBASIC19.56■□□□□ 0.72
AP1S1P61966 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.56■□□□□ 0.72
AP1S1P61966 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.56■□□□□ 0.72
AP1S1P61966 MIR4497-201ENST00000583208 89 ntBASIC19.56■□□□□ 0.72
AP1S1P61966 MIR4785-201ENST00000585005 73 ntBASIC19.56■□□□□ 0.72
AP1S1P61966 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.56■□□□□ 0.72
AP1S1P61966 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP1S1P61966 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP1S1P61966 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.56■□□□□ 0.72
AP1S1P61966 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
AP1S1P61966 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.56■□□□□ 0.72
AP1S1P61966 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP1S1P61966 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
AP1S1P61966 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP1S1P61966 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
AP1S1P61966 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
AP1S1P61966 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.55■□□□□ 0.72
AP1S1P61966 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
AP1S1P61966 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
AP1S1P61966 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP1S1P61966 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
AP1S1P61966 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.55■□□□□ 0.72
AP1S1P61966 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP1S1P61966 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.55■□□□□ 0.72
AP1S1P61966 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP1S1P61966 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.55■□□□□ 0.72
AP1S1P61966 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
AP1S1P61966 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP1S1P61966 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
AP1S1P61966 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP1S1P61966 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.55■□□□□ 0.72
AP1S1P61966 AC104417.2-201ENST00000562989 1793 ntBASIC19.55■□□□□ 0.72
AP1S1P61966 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms