Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
EIF3EP60228 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.04■□□□□ 0.8
EIF3EP60228 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
EIF3EP60228 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
EIF3EP60228 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EIF3EP60228 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.03■□□□□ 0.8
EIF3EP60228 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
EIF3EP60228 YBX1P10-201ENST00000444752 975 ntBASIC20.03■□□□□ 0.8
EIF3EP60228 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EIF3EP60228 SOX15-203ENST00000570788 1093 ntBASIC20.03■□□□□ 0.8
EIF3EP60228 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.03■□□□□ 0.8
EIF3EP60228 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.03■□□□□ 0.8
EIF3EP60228 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.03■□□□□ 0.8
EIF3EP60228 AC104771.1-201ENST00000603335 964 ntBASIC20.03■□□□□ 0.8
EIF3EP60228 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
EIF3EP60228 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EIF3EP60228 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
EIF3EP60228 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.03■□□□□ 0.8
EIF3EP60228 AC004408.2-201ENST00000623613 2777 ntBASIC20.03■□□□□ 0.8
EIF3EP60228 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EIF3EP60228 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
EIF3EP60228 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.03■□□□□ 0.8
EIF3EP60228 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EIF3EP60228 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EIF3EP60228 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EIF3EP60228 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EIF3EP60228 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
EIF3EP60228 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.02■□□□□ 0.8
EIF3EP60228 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EIF3EP60228 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
EIF3EP60228 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
EIF3EP60228 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EIF3EP60228 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
EIF3EP60228 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.02■□□□□ 0.8
EIF3EP60228 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.02■□□□□ 0.8
EIF3EP60228 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.02■□□□□ 0.8
EIF3EP60228 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.02■□□□□ 0.8
EIF3EP60228 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.02■□□□□ 0.8
EIF3EP60228 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
EIF3EP60228 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
EIF3EP60228 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EIF3EP60228 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.02■□□□□ 0.8
EIF3EP60228 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
EIF3EP60228 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EIF3EP60228 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EIF3EP60228 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EIF3EP60228 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EIF3EP60228 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EIF3EP60228 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
EIF3EP60228 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
EIF3EP60228 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
EIF3EP60228 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.02■□□□□ 0.79
EIF3EP60228 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.79
EIF3EP60228 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
EIF3EP60228 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.02■□□□□ 0.79
EIF3EP60228 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
EIF3EP60228 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.79
EIF3EP60228 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
EIF3EP60228 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.01■□□□□ 0.79
EIF3EP60228 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
EIF3EP60228 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
EIF3EP60228 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
EIF3EP60228 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EIF3EP60228 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EIF3EP60228 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
EIF3EP60228 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.01■□□□□ 0.79
EIF3EP60228 AC090192.1-201ENST00000517740 490 ntBASIC20.01■□□□□ 0.79
EIF3EP60228 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.01■□□□□ 0.79
EIF3EP60228 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
EIF3EP60228 AC142086.2-201ENST00000569753 217 ntBASIC20.01■□□□□ 0.79
EIF3EP60228 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.01■□□□□ 0.79
EIF3EP60228 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
EIF3EP60228 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.01■□□□□ 0.79
EIF3EP60228 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EIF3EP60228 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
EIF3EP60228 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
EIF3EP60228 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EIF3EP60228 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
EIF3EP60228 TEX21P-204ENST00000641479 1693 ntBASIC20■□□□□ 0.79
EIF3EP60228 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
EIF3EP60228 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
EIF3EP60228 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
EIF3EP60228 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
EIF3EP60228 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
EIF3EP60228 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
EIF3EP60228 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
EIF3EP60228 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
EIF3EP60228 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20■□□□□ 0.79
EIF3EP60228 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20■□□□□ 0.79
EIF3EP60228 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20■□□□□ 0.79
EIF3EP60228 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20■□□□□ 0.79
EIF3EP60228 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20■□□□□ 0.79
EIF3EP60228 AC008687.6-201ENST00000596318 630 ntBASIC20■□□□□ 0.79
EIF3EP60228 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
EIF3EP60228 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20■□□□□ 0.79
EIF3EP60228 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
EIF3EP60228 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
EIF3EP60228 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20■□□□□ 0.79
EIF3EP60228 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
EIF3EP60228 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms