Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FOXG1P55316 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXG1P55316 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.06■□□□□ 0.32
FOXG1P55316 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXG1P55316 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
FOXG1P55316 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXG1P55316 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
FOXG1P55316 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXG1P55316 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXG1P55316 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
FOXG1P55316 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.05■□□□□ 0.32
FOXG1P55316 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
FOXG1P55316 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.05■□□□□ 0.32
FOXG1P55316 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.05■□□□□ 0.32
FOXG1P55316 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
FOXG1P55316 AP003071.4-201ENST00000562276 1284 ntBASIC17.05■□□□□ 0.32
FOXG1P55316 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.05■□□□□ 0.32
FOXG1P55316 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXG1P55316 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.05■□□□□ 0.32
FOXG1P55316 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
FOXG1P55316 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXG1P55316 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.05■□□□□ 0.32
FOXG1P55316 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXG1P55316 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
FOXG1P55316 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.04■□□□□ 0.32
FOXG1P55316 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.04■□□□□ 0.32
FOXG1P55316 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXG1P55316 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
FOXG1P55316 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.04■□□□□ 0.32
FOXG1P55316 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FOXG1P55316 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.04■□□□□ 0.32
FOXG1P55316 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXG1P55316 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXG1P55316 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXG1P55316 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
FOXG1P55316 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXG1P55316 AL355355.2-201ENST00000442321 338 ntBASIC17.04■□□□□ 0.32
FOXG1P55316 AC011506.1-201ENST00000474329 610 ntBASIC17.04■□□□□ 0.32
FOXG1P55316 NUDT16P1-203ENST00000513809 620 ntBASIC17.04■□□□□ 0.32
FOXG1P55316 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.04■□□□□ 0.32
FOXG1P55316 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.04■□□□□ 0.32
FOXG1P55316 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.04■□□□□ 0.32
FOXG1P55316 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.04■□□□□ 0.32
FOXG1P55316 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FOXG1P55316 SLC25A24-204ENST00000569674 2357 ntBASIC17.04■□□□□ 0.32
FOXG1P55316 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXG1P55316 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXG1P55316 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
FOXG1P55316 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
FOXG1P55316 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
FOXG1P55316 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXG1P55316 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.04■□□□□ 0.32
FOXG1P55316 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
FOXG1P55316 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXG1P55316 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXG1P55316 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXG1P55316 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.03■□□□□ 0.32
FOXG1P55316 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXG1P55316 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXG1P55316 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXG1P55316 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.03■□□□□ 0.32
FOXG1P55316 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.03■□□□□ 0.32
FOXG1P55316 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.03■□□□□ 0.32
FOXG1P55316 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.03■□□□□ 0.32
FOXG1P55316 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXG1P55316 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXG1P55316 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXG1P55316 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
FOXG1P55316 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
FOXG1P55316 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
FOXG1P55316 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.03■□□□□ 0.32
FOXG1P55316 MESTP1-201ENST00000404287 994 ntBASIC17.03■□□□□ 0.32
FOXG1P55316 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
FOXG1P55316 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.03■□□□□ 0.32
FOXG1P55316 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.03■□□□□ 0.32
FOXG1P55316 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXG1P55316 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.03■□□□□ 0.32
FOXG1P55316 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.03■□□□□ 0.32
FOXG1P55316 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.03■□□□□ 0.32
FOXG1P55316 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.03■□□□□ 0.32
FOXG1P55316 MIR4785-201ENST00000585005 73 ntBASIC17.03■□□□□ 0.32
FOXG1P55316 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.03■□□□□ 0.32
FOXG1P55316 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.03■□□□□ 0.32
FOXG1P55316 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXG1P55316 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.03■□□□□ 0.32
FOXG1P55316 REXO1L10P-201ENST00000615707 1290 ntBASIC17.03■□□□□ 0.32
FOXG1P55316 REXO1L12P-201ENST00000622156 912 ntBASIC17.03■□□□□ 0.32
FOXG1P55316 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXG1P55316 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXG1P55316 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXG1P55316 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXG1P55316 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
FOXG1P55316 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXG1P55316 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXG1P55316 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
FOXG1P55316 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.03■□□□□ 0.32
FOXG1P55316 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
FOXG1P55316 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
FOXG1P55316 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.02■□□□□ 0.32
FOXG1P55316 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms