Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PSMD4P55036 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
PSMD4P55036 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.08■□□□□ 0.48
PSMD4P55036 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PSMD4P55036 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
PSMD4P55036 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
PSMD4P55036 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.08■□□□□ 0.48
PSMD4P55036 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.08■□□□□ 0.48
PSMD4P55036 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.08■□□□□ 0.48
PSMD4P55036 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.08■□□□□ 0.48
PSMD4P55036 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
PSMD4P55036 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.08■□□□□ 0.48
PSMD4P55036 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.08■□□□□ 0.48
PSMD4P55036 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PSMD4P55036 AL158211.5-201ENST00000623583 2518 ntBASIC18.08■□□□□ 0.48
PSMD4P55036 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
PSMD4P55036 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.08■□□□□ 0.48
PSMD4P55036 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
PSMD4P55036 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
PSMD4P55036 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.07■□□□□ 0.48
PSMD4P55036 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PSMD4P55036 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.07■□□□□ 0.48
PSMD4P55036 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.07■□□□□ 0.48
PSMD4P55036 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PSMD4P55036 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PSMD4P55036 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PSMD4P55036 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PSMD4P55036 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PSMD4P55036 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PSMD4P55036 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.07■□□□□ 0.48
PSMD4P55036 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.07■□□□□ 0.48
PSMD4P55036 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PSMD4P55036 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.07■□□□□ 0.48
PSMD4P55036 MTDHP1-201ENST00000605323 784 ntBASIC18.07■□□□□ 0.48
PSMD4P55036 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PSMD4P55036 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PSMD4P55036 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PSMD4P55036 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PSMD4P55036 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
PSMD4P55036 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PSMD4P55036 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PSMD4P55036 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PSMD4P55036 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PSMD4P55036 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PSMD4P55036 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PSMD4P55036 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PSMD4P55036 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PSMD4P55036 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PSMD4P55036 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.06■□□□□ 0.48
PSMD4P55036 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.06■□□□□ 0.48
PSMD4P55036 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PSMD4P55036 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PSMD4P55036 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PSMD4P55036 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PSMD4P55036 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PSMD4P55036 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
PSMD4P55036 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PSMD4P55036 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.06■□□□□ 0.48
PSMD4P55036 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PSMD4P55036 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PSMD4P55036 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PSMD4P55036 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PSMD4P55036 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PSMD4P55036 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PSMD4P55036 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.06■□□□□ 0.48
PSMD4P55036 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PSMD4P55036 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.06■□□□□ 0.48
PSMD4P55036 AC239809.2-201ENST00000415381 517 ntBASIC18.06■□□□□ 0.48
PSMD4P55036 TUBB8P6-201ENST00000436895 1288 ntBASIC18.06■□□□□ 0.48
PSMD4P55036 MIR4651-201ENST00000582622 73 ntBASIC18.06■□□□□ 0.48
PSMD4P55036 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.06■□□□□ 0.48
PSMD4P55036 NBPF21P-201ENST00000425093 1451 ntBASIC18.06■□□□□ 0.48
PSMD4P55036 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PSMD4P55036 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PSMD4P55036 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PSMD4P55036 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.06■□□□□ 0.48
PSMD4P55036 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.05■□□□□ 0.48
PSMD4P55036 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PSMD4P55036 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.05■□□□□ 0.48
PSMD4P55036 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.05■□□□□ 0.48
PSMD4P55036 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PSMD4P55036 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.05■□□□□ 0.48
PSMD4P55036 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.05■□□□□ 0.48
PSMD4P55036 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PSMD4P55036 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PSMD4P55036 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PSMD4P55036 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PSMD4P55036 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PSMD4P55036 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PSMD4P55036 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PSMD4P55036 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
PSMD4P55036 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PSMD4P55036 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PSMD4P55036 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.05■□□□□ 0.48
PSMD4P55036 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.05■□□□□ 0.48
PSMD4P55036 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.05■□□□□ 0.48
PSMD4P55036 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.05■□□□□ 0.48
PSMD4P55036 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PSMD4P55036 AC073648.6-201ENST00000641589 218 ntBASIC18.05■□□□□ 0.48
PSMD4P55036 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms