Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.82■■□□□ 1.08
EPHB4P54760 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
EPHB4P54760 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
EPHB4P54760 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
EPHB4P54760 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
EPHB4P54760 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
EPHB4P54760 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
EPHB4P54760 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
EPHB4P54760 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
EPHB4P54760 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.82■■□□□ 1.08
EPHB4P54760 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
EPHB4P54760 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
EPHB4P54760 PCDHAC2-203ENST00000615316 3011 ntBASIC21.82■■□□□ 1.08
EPHB4P54760 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
EPHB4P54760 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
EPHB4P54760 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.81■■□□□ 1.08
EPHB4P54760 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
EPHB4P54760 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
EPHB4P54760 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
EPHB4P54760 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.81■■□□□ 1.08
EPHB4P54760 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
EPHB4P54760 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
EPHB4P54760 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
EPHB4P54760 COPE-203ENST00000351079 907 ntTSL 2 BASIC21.81■■□□□ 1.08
EPHB4P54760 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
EPHB4P54760 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
EPHB4P54760 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
EPHB4P54760 AC091390.4-202ENST00000476426 537 ntBASIC21.81■■□□□ 1.08
EPHB4P54760 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC21.81■■□□□ 1.08
EPHB4P54760 AP005242.2-201ENST00000580065 1175 ntBASIC21.81■■□□□ 1.08
EPHB4P54760 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.81■■□□□ 1.08
EPHB4P54760 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
EPHB4P54760 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
EPHB4P54760 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
EPHB4P54760 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
EPHB4P54760 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.8■■□□□ 1.08
EPHB4P54760 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
EPHB4P54760 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.8■■□□□ 1.08
EPHB4P54760 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
EPHB4P54760 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.8■■□□□ 1.08
EPHB4P54760 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
EPHB4P54760 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
EPHB4P54760 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC21.8■■□□□ 1.08
EPHB4P54760 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.8■■□□□ 1.08
EPHB4P54760 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
EPHB4P54760 AL031985.4-201ENST00000642138 673 ntBASIC21.8■■□□□ 1.08
EPHB4P54760 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
EPHB4P54760 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.8■■□□□ 1.08
EPHB4P54760 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
EPHB4P54760 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
EPHB4P54760 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
EPHB4P54760 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
EPHB4P54760 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
EPHB4P54760 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
EPHB4P54760 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.79■■□□□ 1.08
EPHB4P54760 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
EPHB4P54760 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.79■■□□□ 1.08
EPHB4P54760 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
EPHB4P54760 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
EPHB4P54760 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
EPHB4P54760 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC21.79■■□□□ 1.08
EPHB4P54760 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC21.79■■□□□ 1.08
EPHB4P54760 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
EPHB4P54760 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
EPHB4P54760 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
EPHB4P54760 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
EPHB4P54760 PLK5-205ENST00000642079 1969 ntBASIC21.79■■□□□ 1.08
EPHB4P54760 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
EPHB4P54760 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
EPHB4P54760 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.79■■□□□ 1.08
EPHB4P54760 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
EPHB4P54760 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
EPHB4P54760 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.79■■□□□ 1.08
EPHB4P54760 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.78■■□□□ 1.08
EPHB4P54760 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.78■■□□□ 1.08
EPHB4P54760 FSCN1P1-201ENST00000568912 1481 ntBASIC21.78■■□□□ 1.08
EPHB4P54760 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
EPHB4P54760 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
EPHB4P54760 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
EPHB4P54760 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
EPHB4P54760 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
EPHB4P54760 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
EPHB4P54760 FAM8A6P-201ENST00000407496 1135 ntBASIC21.78■■□□□ 1.08
EPHB4P54760 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
EPHB4P54760 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.78■■□□□ 1.08
EPHB4P54760 KRT18P48-201ENST00000434763 852 ntBASIC21.78■■□□□ 1.08
EPHB4P54760 DUSP5P1-201ENST00000441325 1139 ntBASIC21.78■■□□□ 1.08
EPHB4P54760 AC009947.2-201ENST00000444014 672 ntBASIC21.78■■□□□ 1.08
EPHB4P54760 AC011506.1-201ENST00000474329 610 ntBASIC21.78■■□□□ 1.08
EPHB4P54760 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.78■■□□□ 1.08
EPHB4P54760 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.78■■□□□ 1.08
EPHB4P54760 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC21.78■■□□□ 1.08
EPHB4P54760 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.78■■□□□ 1.08
EPHB4P54760 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.78■■□□□ 1.08
EPHB4P54760 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.78■■□□□ 1.08
EPHB4P54760 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
EPHB4P54760 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
EPHB4P54760 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
EPHB4P54760 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
EPHB4P54760 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms