Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.07■□□□□ 0.64
CLCNKAP51800 AC004980.1-204ENST00000429707 299 ntBASIC19.07■□□□□ 0.64
CLCNKAP51800 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.07■□□□□ 0.64
CLCNKAP51800 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLCNKAP51800 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLCNKAP51800 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLCNKAP51800 BX088651.1-201ENST00000540551 451 ntBASIC19.07■□□□□ 0.64
CLCNKAP51800 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLCNKAP51800 AC131212.4-201ENST00000623606 975 ntBASIC19.07■□□□□ 0.64
CLCNKAP51800 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.07■□□□□ 0.64
CLCNKAP51800 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.07■□□□□ 0.64
CLCNKAP51800 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CLCNKAP51800 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLCNKAP51800 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLCNKAP51800 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLCNKAP51800 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.06■□□□□ 0.64
CLCNKAP51800 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLCNKAP51800 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLCNKAP51800 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CLCNKAP51800 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLCNKAP51800 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLCNKAP51800 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLCNKAP51800 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLCNKAP51800 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.06■□□□□ 0.64
CLCNKAP51800 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLCNKAP51800 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLCNKAP51800 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
CLCNKAP51800 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.06■□□□□ 0.64
CLCNKAP51800 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.06■□□□□ 0.64
CLCNKAP51800 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLCNKAP51800 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLCNKAP51800 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.06■□□□□ 0.64
CLCNKAP51800 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.06■□□□□ 0.64
CLCNKAP51800 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CLCNKAP51800 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.06■□□□□ 0.64
CLCNKAP51800 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CLCNKAP51800 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.06■□□□□ 0.64
CLCNKAP51800 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
CLCNKAP51800 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLCNKAP51800 REXO1L10P-201ENST00000615707 1290 ntBASIC19.06■□□□□ 0.64
CLCNKAP51800 REXO1L12P-201ENST00000622156 912 ntBASIC19.06■□□□□ 0.64
CLCNKAP51800 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
CLCNKAP51800 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLCNKAP51800 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLCNKAP51800 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLCNKAP51800 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.06■□□□□ 0.64
CLCNKAP51800 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLCNKAP51800 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CLCNKAP51800 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLCNKAP51800 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLCNKAP51800 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLCNKAP51800 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLCNKAP51800 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLCNKAP51800 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.05■□□□□ 0.64
CLCNKAP51800 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLCNKAP51800 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.05■□□□□ 0.64
CLCNKAP51800 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.05■□□□□ 0.64
CLCNKAP51800 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLCNKAP51800 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLCNKAP51800 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
CLCNKAP51800 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLCNKAP51800 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLCNKAP51800 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
CLCNKAP51800 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLCNKAP51800 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLCNKAP51800 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
CLCNKAP51800 FSCN1P1-201ENST00000568912 1481 ntBASIC19.04■□□□□ 0.64
CLCNKAP51800 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLCNKAP51800 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLCNKAP51800 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLCNKAP51800 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CLCNKAP51800 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.04■□□□□ 0.64
CLCNKAP51800 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLCNKAP51800 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLCNKAP51800 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.04■□□□□ 0.64
CLCNKAP51800 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.04■□□□□ 0.64
CLCNKAP51800 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
CLCNKAP51800 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.04■□□□□ 0.64
CLCNKAP51800 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.04■□□□□ 0.64
CLCNKAP51800 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.04■□□□□ 0.64
CLCNKAP51800 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.04■□□□□ 0.64
CLCNKAP51800 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.04■□□□□ 0.64
CLCNKAP51800 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.04■□□□□ 0.64
CLCNKAP51800 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLCNKAP51800 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.04■□□□□ 0.64
CLCNKAP51800 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLCNKAP51800 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.04■□□□□ 0.64
CLCNKAP51800 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLCNKAP51800 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLCNKAP51800 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLCNKAP51800 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CLCNKAP51800 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLCNKAP51800 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.03■□□□□ 0.64
CLCNKAP51800 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLCNKAP51800 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.03■□□□□ 0.64
CLCNKAP51800 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.03■□□□□ 0.64
CLCNKAP51800 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLCNKAP51800 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.03■□□□□ 0.64
CLCNKAP51800 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.03■□□□□ 0.64
CLCNKAP51800 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms