Protein–RNA interactions for Protein: P48067

SLC6A9, Sodium- and chloride-dependent glycine transporter 1, humanhuman

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A9P48067 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC6A9P48067 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SLC6A9P48067 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC6A9P48067 CD99P1-205ENST00000527459 561 ntBASIC17.16■□□□□ 0.34
SLC6A9P48067 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
SLC6A9P48067 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC6A9P48067 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SLC6A9P48067 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC6A9P48067 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC6A9P48067 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SLC6A9P48067 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC6A9P48067 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
SLC6A9P48067 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC6A9P48067 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC6A9P48067 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC6A9P48067 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.16■□□□□ 0.34
SLC6A9P48067 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.15■□□□□ 0.34
SLC6A9P48067 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC6A9P48067 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SLC6A9P48067 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SLC6A9P48067 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC6A9P48067 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SLC6A9P48067 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.15■□□□□ 0.34
SLC6A9P48067 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.15■□□□□ 0.34
SLC6A9P48067 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.15■□□□□ 0.34
SLC6A9P48067 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.15■□□□□ 0.34
SLC6A9P48067 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC6A9P48067 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.15■□□□□ 0.34
SLC6A9P48067 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.15■□□□□ 0.34
SLC6A9P48067 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SLC6A9P48067 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC6A9P48067 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC6A9P48067 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.15■□□□□ 0.34
SLC6A9P48067 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.15■□□□□ 0.34
SLC6A9P48067 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
SLC6A9P48067 AC116351.2-201ENST00000606540 1585 ntBASIC17.15■□□□□ 0.34
SLC6A9P48067 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SLC6A9P48067 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SLC6A9P48067 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SLC6A9P48067 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SLC6A9P48067 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.15■□□□□ 0.34
SLC6A9P48067 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SLC6A9P48067 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
SLC6A9P48067 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
SLC6A9P48067 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.14■□□□□ 0.33
SLC6A9P48067 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A9P48067 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.14■□□□□ 0.33
SLC6A9P48067 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A9P48067 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A9P48067 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.14■□□□□ 0.33
SLC6A9P48067 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A9P48067 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.14■□□□□ 0.33
SLC6A9P48067 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A9P48067 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A9P48067 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A9P48067 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A9P48067 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.14■□□□□ 0.33
SLC6A9P48067 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.14■□□□□ 0.33
SLC6A9P48067 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.14■□□□□ 0.33
SLC6A9P48067 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.14■□□□□ 0.33
SLC6A9P48067 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.14■□□□□ 0.33
SLC6A9P48067 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
SLC6A9P48067 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A9P48067 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A9P48067 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
SLC6A9P48067 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.14■□□□□ 0.33
SLC6A9P48067 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A9P48067 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.14■□□□□ 0.33
SLC6A9P48067 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.14■□□□□ 0.33
SLC6A9P48067 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A9P48067 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A9P48067 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A9P48067 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC6A9P48067 AC093484.2-201ENST00000580996 2166 ntBASIC17.13■□□□□ 0.33
SLC6A9P48067 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.13■□□□□ 0.33
SLC6A9P48067 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
SLC6A9P48067 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SLC6A9P48067 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC6A9P48067 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SLC6A9P48067 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC6A9P48067 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC6A9P48067 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC6A9P48067 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC6A9P48067 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.13■□□□□ 0.33
SLC6A9P48067 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SLC6A9P48067 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.13■□□□□ 0.33
SLC6A9P48067 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SLC6A9P48067 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.13■□□□□ 0.33
SLC6A9P48067 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC6A9P48067 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
SLC6A9P48067 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.13■□□□□ 0.33
SLC6A9P48067 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC6A9P48067 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC6A9P48067 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC6A9P48067 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SLC6A9P48067 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC6A9P48067 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SLC6A9P48067 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC6A9P48067 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC6A9P48067 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms