Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC15.9■□□□□ 0.14
NKX2-1P43699 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX2-1P43699 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC15.9■□□□□ 0.14
NKX2-1P43699 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX2-1P43699 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX2-1P43699 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX2-1P43699 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX2-1P43699 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX2-1P43699 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
NKX2-1P43699 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
NKX2-1P43699 AC135050.7-201ENST00000624508 2218 ntBASIC15.9■□□□□ 0.14
NKX2-1P43699 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX2-1P43699 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
NKX2-1P43699 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC15.9■□□□□ 0.14
NKX2-1P43699 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX2-1P43699 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC15.9■□□□□ 0.14
NKX2-1P43699 HYI-206ENST00000372434 1025 ntTSL 5 BASIC15.9■□□□□ 0.14
NKX2-1P43699 MIR638-201ENST00000385237 100 ntBASIC15.9■□□□□ 0.14
NKX2-1P43699 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC15.9■□□□□ 0.14
NKX2-1P43699 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
NKX2-1P43699 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
NKX2-1P43699 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC15.9■□□□□ 0.14
NKX2-1P43699 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX2-1P43699 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX2-1P43699 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX2-1P43699 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX2-1P43699 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NKX2-1P43699 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
NKX2-1P43699 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX2-1P43699 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX2-1P43699 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX2-1P43699 CYP21A1P-202ENST00000354927 1481 ntBASIC15.9■□□□□ 0.14
NKX2-1P43699 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX2-1P43699 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX2-1P43699 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NKX2-1P43699 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NKX2-1P43699 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NKX2-1P43699 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NKX2-1P43699 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC15.89■□□□□ 0.13
NKX2-1P43699 AC018470.1-201ENST00000624790 3129 ntBASIC15.89■□□□□ 0.13
NKX2-1P43699 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
NKX2-1P43699 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
NKX2-1P43699 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NKX2-1P43699 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NKX2-1P43699 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
NKX2-1P43699 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NKX2-1P43699 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
NKX2-1P43699 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NKX2-1P43699 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NKX2-1P43699 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC15.89■□□□□ 0.13
NKX2-1P43699 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC15.89■□□□□ 0.13
NKX2-1P43699 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC15.89■□□□□ 0.13
NKX2-1P43699 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC15.89■□□□□ 0.13
NKX2-1P43699 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC15.89■□□□□ 0.13
NKX2-1P43699 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC15.89■□□□□ 0.13
NKX2-1P43699 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC15.89■□□□□ 0.13
NKX2-1P43699 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC15.89■□□□□ 0.13
NKX2-1P43699 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NKX2-1P43699 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NKX2-1P43699 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NKX2-1P43699 PHGDH-210ENST00000641115 1638 ntBASIC15.89■□□□□ 0.13
NKX2-1P43699 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC15.89■□□□□ 0.13
NKX2-1P43699 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
NKX2-1P43699 AC019069.1-201ENST00000610008 1333 ntBASIC15.89■□□□□ 0.13
NKX2-1P43699 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
NKX2-1P43699 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
NKX2-1P43699 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
NKX2-1P43699 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
NKX2-1P43699 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NKX2-1P43699 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NKX2-1P43699 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC15.88■□□□□ 0.13
NKX2-1P43699 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
NKX2-1P43699 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
NKX2-1P43699 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NKX2-1P43699 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NKX2-1P43699 AC090164.3-201ENST00000610780 2143 ntBASIC15.88■□□□□ 0.13
NKX2-1P43699 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
NKX2-1P43699 PKD1P1-201ENST00000458669 6805 ntBASIC15.88■□□□□ 0.13
NKX2-1P43699 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NKX2-1P43699 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NKX2-1P43699 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
NKX2-1P43699 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NKX2-1P43699 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NKX2-1P43699 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC15.88■□□□□ 0.13
NKX2-1P43699 TESC-206ENST00000541210 936 ntTSL 3 BASIC15.88■□□□□ 0.13
NKX2-1P43699 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC15.88■□□□□ 0.13
NKX2-1P43699 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
NKX2-1P43699 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NKX2-1P43699 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
NKX2-1P43699 USP49-202ENST00000373010 2446 ntTSL 5 BASIC15.88■□□□□ 0.13
NKX2-1P43699 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NKX2-1P43699 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
NKX2-1P43699 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
NKX2-1P43699 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NKX2-1P43699 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NKX2-1P43699 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NKX2-1P43699 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC15.87■□□□□ 0.13
NKX2-1P43699 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NKX2-1P43699 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NKX2-1P43699 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms