Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SOX11P35716 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.94■□□□□ 0.62
SOX11P35716 PNMA6B-201ENST00000538162 1200 ntBASIC18.94■□□□□ 0.62
SOX11P35716 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SOX11P35716 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.94■□□□□ 0.62
SOX11P35716 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SOX11P35716 AC008403.3-201ENST00000598924 454 ntBASIC18.94■□□□□ 0.62
SOX11P35716 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.94■□□□□ 0.62
SOX11P35716 AC073648.6-201ENST00000641589 218 ntBASIC18.94■□□□□ 0.62
SOX11P35716 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.94■□□□□ 0.62
SOX11P35716 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SOX11P35716 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.94■□□□□ 0.62
SOX11P35716 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SOX11P35716 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SOX11P35716 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.94■□□□□ 0.62
SOX11P35716 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SOX11P35716 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.93■□□□□ 0.62
SOX11P35716 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.93■□□□□ 0.62
SOX11P35716 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SOX11P35716 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.93■□□□□ 0.62
SOX11P35716 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SOX11P35716 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.93■□□□□ 0.62
SOX11P35716 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.93■□□□□ 0.62
SOX11P35716 TMEM179-206ENST00000616017 1645 ntBASIC18.93■□□□□ 0.62
SOX11P35716 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.93■□□□□ 0.62
SOX11P35716 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SOX11P35716 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SOX11P35716 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SOX11P35716 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SOX11P35716 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SOX11P35716 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SOX11P35716 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.93■□□□□ 0.62
SOX11P35716 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.93■□□□□ 0.62
SOX11P35716 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.93■□□□□ 0.62
SOX11P35716 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
SOX11P35716 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SOX11P35716 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SOX11P35716 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.93■□□□□ 0.62
SOX11P35716 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.93■□□□□ 0.62
SOX11P35716 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.92■□□□□ 0.62
SOX11P35716 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.92■□□□□ 0.62
SOX11P35716 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.92■□□□□ 0.62
SOX11P35716 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SOX11P35716 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.92■□□□□ 0.62
SOX11P35716 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SOX11P35716 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SOX11P35716 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SOX11P35716 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SOX11P35716 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SOX11P35716 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SOX11P35716 TREX1-205ENST00000625293 1783 ntBASIC18.92■□□□□ 0.62
SOX11P35716 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SOX11P35716 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.92■□□□□ 0.62
SOX11P35716 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SOX11P35716 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.92■□□□□ 0.62
SOX11P35716 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.92■□□□□ 0.62
SOX11P35716 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SOX11P35716 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.92■□□□□ 0.62
SOX11P35716 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.92■□□□□ 0.62
SOX11P35716 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.92■□□□□ 0.62
SOX11P35716 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SOX11P35716 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SOX11P35716 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SOX11P35716 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SOX11P35716 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.91■□□□□ 0.62
SOX11P35716 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
SOX11P35716 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.91■□□□□ 0.62
SOX11P35716 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SOX11P35716 AC087633.2-202ENST00000565166 1439 ntBASIC18.91■□□□□ 0.62
SOX11P35716 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.91■□□□□ 0.62
SOX11P35716 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SOX11P35716 BX323043.1-201ENST00000641006 1765 ntBASIC18.91■□□□□ 0.62
SOX11P35716 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SOX11P35716 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SOX11P35716 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SOX11P35716 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SOX11P35716 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SOX11P35716 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SOX11P35716 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.91■□□□□ 0.62
SOX11P35716 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SOX11P35716 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SOX11P35716 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SOX11P35716 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SOX11P35716 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.91■□□□□ 0.62
SOX11P35716 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.91■□□□□ 0.62
SOX11P35716 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SOX11P35716 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SOX11P35716 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.91■□□□□ 0.62
SOX11P35716 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SOX11P35716 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.91■□□□□ 0.62
SOX11P35716 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.91■□□□□ 0.62
SOX11P35716 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SOX11P35716 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SOX11P35716 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SOX11P35716 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SOX11P35716 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.91■□□□□ 0.62
SOX11P35716 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SOX11P35716 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SOX11P35716 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SOX11P35716 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms