Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LCN1P31025 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LCN1P31025 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LCN1P31025 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LCN1P31025 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
LCN1P31025 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
LCN1P31025 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
LCN1P31025 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LCN1P31025 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
LCN1P31025 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LCN1P31025 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.97■□□□□ 0.47
LCN1P31025 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LCN1P31025 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LCN1P31025 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
LCN1P31025 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LCN1P31025 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LCN1P31025 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LCN1P31025 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LCN1P31025 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LCN1P31025 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.97■□□□□ 0.47
LCN1P31025 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.97■□□□□ 0.47
LCN1P31025 RN7SL471P-201ENST00000580476 299 ntBASIC17.97■□□□□ 0.47
LCN1P31025 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.97■□□□□ 0.47
LCN1P31025 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LCN1P31025 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LCN1P31025 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LCN1P31025 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LCN1P31025 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.97■□□□□ 0.47
LCN1P31025 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LCN1P31025 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.96■□□□□ 0.47
LCN1P31025 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LCN1P31025 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LCN1P31025 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LCN1P31025 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.96■□□□□ 0.47
LCN1P31025 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
LCN1P31025 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LCN1P31025 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.96■□□□□ 0.47
LCN1P31025 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.96■□□□□ 0.47
LCN1P31025 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LCN1P31025 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
LCN1P31025 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LCN1P31025 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LCN1P31025 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.95■□□□□ 0.46
LCN1P31025 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
LCN1P31025 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LCN1P31025 FAM201B-201ENST00000458407 597 ntBASIC17.95■□□□□ 0.46
LCN1P31025 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LCN1P31025 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LCN1P31025 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
LCN1P31025 AC006058.3-201ENST00000606217 1069 ntBASIC17.95■□□□□ 0.46
LCN1P31025 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LCN1P31025 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.95■□□□□ 0.46
LCN1P31025 AC073648.6-201ENST00000641589 218 ntBASIC17.95■□□□□ 0.46
LCN1P31025 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LCN1P31025 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LCN1P31025 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LCN1P31025 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
LCN1P31025 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
LCN1P31025 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
LCN1P31025 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
LCN1P31025 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LCN1P31025 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LCN1P31025 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
LCN1P31025 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LCN1P31025 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LCN1P31025 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LCN1P31025 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LCN1P31025 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LCN1P31025 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
LCN1P31025 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LCN1P31025 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LCN1P31025 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LCN1P31025 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
LCN1P31025 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
LCN1P31025 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
LCN1P31025 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LCN1P31025 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.94■□□□□ 0.46
LCN1P31025 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LCN1P31025 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
LCN1P31025 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
LCN1P31025 AC239809.2-201ENST00000415381 517 ntBASIC17.94■□□□□ 0.46
LCN1P31025 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.94■□□□□ 0.46
LCN1P31025 AC128676.1-201ENST00000454392 318 ntBASIC17.94■□□□□ 0.46
LCN1P31025 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.94■□□□□ 0.46
LCN1P31025 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.94■□□□□ 0.46
LCN1P31025 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.94■□□□□ 0.46
LCN1P31025 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.94■□□□□ 0.46
LCN1P31025 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
LCN1P31025 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
LCN1P31025 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LCN1P31025 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
LCN1P31025 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LCN1P31025 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LCN1P31025 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LCN1P31025 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LCN1P31025 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
LCN1P31025 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LCN1P31025 PCDHAC2-203ENST00000615316 3011 ntBASIC17.93■□□□□ 0.46
LCN1P31025 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LCN1P31025 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms