Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
GDF1P27539 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
GDF1P27539 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GDF1P27539 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
GDF1P27539 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.63■□□□□ 0.41
GDF1P27539 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.63■□□□□ 0.41
GDF1P27539 AC116562.2-201ENST00000507042 360 ntBASIC17.63■□□□□ 0.41
GDF1P27539 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.63■□□□□ 0.41
GDF1P27539 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GDF1P27539 AP000525.1-201ENST00000608286 694 ntBASIC17.63■□□□□ 0.41
GDF1P27539 MIR6786-201ENST00000616843 113 ntBASIC17.63■□□□□ 0.41
GDF1P27539 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.63■□□□□ 0.41
GDF1P27539 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.63■□□□□ 0.41
GDF1P27539 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
GDF1P27539 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
GDF1P27539 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.63■□□□□ 0.41
GDF1P27539 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.63■□□□□ 0.41
GDF1P27539 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GDF1P27539 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.63■□□□□ 0.41
GDF1P27539 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GDF1P27539 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GDF1P27539 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GDF1P27539 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GDF1P27539 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
GDF1P27539 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
GDF1P27539 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GDF1P27539 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
GDF1P27539 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
GDF1P27539 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GDF1P27539 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GDF1P27539 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GDF1P27539 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GDF1P27539 AC087499.1-201ENST00000418141 1075 ntBASIC17.62■□□□□ 0.41
GDF1P27539 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
GDF1P27539 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.62■□□□□ 0.41
GDF1P27539 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.62■□□□□ 0.41
GDF1P27539 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.62■□□□□ 0.41
GDF1P27539 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.62■□□□□ 0.41
GDF1P27539 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GDF1P27539 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GDF1P27539 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
GDF1P27539 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GDF1P27539 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GDF1P27539 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GDF1P27539 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GDF1P27539 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GDF1P27539 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
GDF1P27539 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.62■□□□□ 0.41
GDF1P27539 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GDF1P27539 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.62■□□□□ 0.41
GDF1P27539 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
GDF1P27539 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
GDF1P27539 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GDF1P27539 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
GDF1P27539 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GDF1P27539 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
GDF1P27539 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GDF1P27539 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.61■□□□□ 0.41
GDF1P27539 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
GDF1P27539 MMP23A-201ENST00000234610 1017 ntBASIC17.61■□□□□ 0.41
GDF1P27539 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GDF1P27539 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GDF1P27539 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GDF1P27539 MIR1238-201ENST00000408483 83 ntBASIC17.61■□□□□ 0.41
GDF1P27539 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
GDF1P27539 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GDF1P27539 ECEL1P3-201ENST00000427961 737 ntBASIC17.61■□□□□ 0.41
GDF1P27539 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.61■□□□□ 0.41
GDF1P27539 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GDF1P27539 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.61■□□□□ 0.41
GDF1P27539 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.61■□□□□ 0.41
GDF1P27539 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.61■□□□□ 0.41
GDF1P27539 AC133561.5-201ENST00000635547 218 ntBASIC17.61■□□□□ 0.41
GDF1P27539 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
GDF1P27539 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GDF1P27539 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GDF1P27539 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GDF1P27539 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.61■□□□□ 0.41
GDF1P27539 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.61■□□□□ 0.41
GDF1P27539 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
GDF1P27539 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
GDF1P27539 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
GDF1P27539 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GDF1P27539 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
GDF1P27539 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GDF1P27539 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
GDF1P27539 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GDF1P27539 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
GDF1P27539 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
GDF1P27539 AC211429.1-201ENST00000415277 523 ntBASIC17.6■□□□□ 0.41
GDF1P27539 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.6■□□□□ 0.41
GDF1P27539 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GDF1P27539 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.6■□□□□ 0.41
GDF1P27539 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.6■□□□□ 0.41
GDF1P27539 B3GAT3P1-201ENST00000471720 806 ntBASIC17.6■□□□□ 0.41
GDF1P27539 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.6■□□□□ 0.41
GDF1P27539 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GDF1P27539 LINC01023-201ENST00000606054 436 ntBASIC17.6■□□□□ 0.41
GDF1P27539 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
GDF1P27539 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms