Protein–RNA interactions for Protein: P27449

ATP6V0C, V-type proton ATPase 16 kDa proteolipid subunit, humanhuman

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0CP27449 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
ATP6V0CP27449 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ATP6V0CP27449 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.54■□□□□ 0.08
ATP6V0CP27449 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
ATP6V0CP27449 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
ATP6V0CP27449 SAPCD2P1-201ENST00000395413 1184 ntBASIC15.54■□□□□ 0.08
ATP6V0CP27449 AC010141.2-201ENST00000452426 721 ntBASIC15.54■□□□□ 0.08
ATP6V0CP27449 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC15.54■□□□□ 0.08
ATP6V0CP27449 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC15.54■□□□□ 0.08
ATP6V0CP27449 SLC7A5P2-201ENST00000553010 536 ntBASIC15.54■□□□□ 0.08
ATP6V0CP27449 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC15.54■□□□□ 0.08
ATP6V0CP27449 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ATP6V0CP27449 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ATP6V0CP27449 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.54■□□□□ 0.08
ATP6V0CP27449 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ATP6V0CP27449 USP39-202ENST00000409025 1946 ntTSL 5 BASIC15.54■□□□□ 0.08
ATP6V0CP27449 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ATP6V0CP27449 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC15.54■□□□□ 0.08
ATP6V0CP27449 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ATP6V0CP27449 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ATP6V0CP27449 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
ATP6V0CP27449 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
ATP6V0CP27449 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ATP6V0CP27449 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ATP6V0CP27449 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATP6V0CP27449 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
ATP6V0CP27449 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC15.53■□□□□ 0.08
ATP6V0CP27449 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
ATP6V0CP27449 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC15.53■□□□□ 0.08
ATP6V0CP27449 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATP6V0CP27449 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC15.53■□□□□ 0.08
ATP6V0CP27449 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATP6V0CP27449 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ATP6V0CP27449 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATP6V0CP27449 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC15.53■□□□□ 0.08
ATP6V0CP27449 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATP6V0CP27449 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATP6V0CP27449 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATP6V0CP27449 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC15.53■□□□□ 0.08
ATP6V0CP27449 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
ATP6V0CP27449 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATP6V0CP27449 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ATP6V0CP27449 MPST-204ENST00000404393 1329 ntTSL 5 BASIC15.53■□□□□ 0.08
ATP6V0CP27449 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ATP6V0CP27449 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATP6V0CP27449 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ATP6V0CP27449 MIR572-201ENST00000384983 95 ntBASIC15.53■□□□□ 0.08
ATP6V0CP27449 GRAMD4P2-201ENST00000423297 1097 ntBASIC15.53■□□□□ 0.08
ATP6V0CP27449 AC105265.2-201ENST00000467189 838 ntBASIC15.53■□□□□ 0.08
ATP6V0CP27449 AC079140.4-201ENST00000507448 529 ntBASIC15.53■□□□□ 0.08
ATP6V0CP27449 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC15.53■□□□□ 0.08
ATP6V0CP27449 MPST-208ENST00000628507 698 ntTSL 5 BASIC15.53■□□□□ 0.08
ATP6V0CP27449 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATP6V0CP27449 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
ATP6V0CP27449 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ATP6V0CP27449 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ATP6V0CP27449 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC15.53■□□□□ 0.08
ATP6V0CP27449 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ATP6V0CP27449 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATP6V0CP27449 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATP6V0CP27449 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATP6V0CP27449 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC15.52■□□□□ 0.08
ATP6V0CP27449 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATP6V0CP27449 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATP6V0CP27449 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
ATP6V0CP27449 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATP6V0CP27449 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATP6V0CP27449 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATP6V0CP27449 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATP6V0CP27449 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
ATP6V0CP27449 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
ATP6V0CP27449 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
ATP6V0CP27449 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
ATP6V0CP27449 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATP6V0CP27449 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATP6V0CP27449 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATP6V0CP27449 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATP6V0CP27449 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATP6V0CP27449 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATP6V0CP27449 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ATP6V0CP27449 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC15.52■□□□□ 0.08
ATP6V0CP27449 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ATP6V0CP27449 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC15.52■□□□□ 0.08
ATP6V0CP27449 TPRG1LP1-201ENST00000598702 760 ntBASIC15.52■□□□□ 0.08
ATP6V0CP27449 AC067852.2-201ENST00000590513 2313 ntBASIC15.52■□□□□ 0.07
ATP6V0CP27449 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
ATP6V0CP27449 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
ATP6V0CP27449 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
ATP6V0CP27449 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
ATP6V0CP27449 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
ATP6V0CP27449 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
ATP6V0CP27449 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
ATP6V0CP27449 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC15.52■□□□□ 0.07
ATP6V0CP27449 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
ATP6V0CP27449 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC15.52■□□□□ 0.07
ATP6V0CP27449 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
ATP6V0CP27449 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
ATP6V0CP27449 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.52■□□□□ 0.07
ATP6V0CP27449 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATP6V0CP27449 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms