Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC16.73■□□□□ 0.27
CCL1P22362 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.73■□□□□ 0.27
CCL1P22362 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCL1P22362 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
CCL1P22362 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCL1P22362 AL049812.1-201ENST00000432563 2267 ntBASIC16.73■□□□□ 0.27
CCL1P22362 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCL1P22362 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCL1P22362 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCL1P22362 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCL1P22362 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.73■□□□□ 0.27
CCL1P22362 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.73■□□□□ 0.27
CCL1P22362 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCL1P22362 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CCL1P22362 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CCL1P22362 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.72■□□□□ 0.27
CCL1P22362 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCL1P22362 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CCL1P22362 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCL1P22362 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CCL1P22362 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCL1P22362 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCL1P22362 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCL1P22362 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCL1P22362 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.72■□□□□ 0.27
CCL1P22362 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
CCL1P22362 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCL1P22362 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC16.72■□□□□ 0.27
CCL1P22362 TK2-208ENST00000545043 1120 ntTSL 2 BASIC16.72■□□□□ 0.27
CCL1P22362 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CCL1P22362 AC098934.4-201ENST00000564127 592 ntBASIC16.72■□□□□ 0.27
CCL1P22362 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.72■□□□□ 0.27
CCL1P22362 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.72■□□□□ 0.27
CCL1P22362 GAMT-205ENST00000640762 751 ntTSL 5 BASIC16.72■□□□□ 0.27
CCL1P22362 AC006333.2-201ENST00000607957 2099 ntBASIC16.72■□□□□ 0.27
CCL1P22362 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCL1P22362 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.72■□□□□ 0.27
CCL1P22362 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCL1P22362 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCL1P22362 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCL1P22362 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CCL1P22362 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.72■□□□□ 0.27
CCL1P22362 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCL1P22362 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CCL1P22362 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCL1P22362 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCL1P22362 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
CCL1P22362 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.71■□□□□ 0.27
CCL1P22362 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCL1P22362 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCL1P22362 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCL1P22362 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCL1P22362 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCL1P22362 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCL1P22362 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCL1P22362 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCL1P22362 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCL1P22362 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCL1P22362 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCL1P22362 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.27
CCL1P22362 AL138781.1-201ENST00000566567 1274 ntBASIC16.71■□□□□ 0.27
CCL1P22362 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC16.71■□□□□ 0.27
CCL1P22362 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCL1P22362 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCL1P22362 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCL1P22362 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCL1P22362 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.71■□□□□ 0.27
CCL1P22362 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.71■□□□□ 0.27
CCL1P22362 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
CCL1P22362 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
CCL1P22362 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL1P22362 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL1P22362 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCL1P22362 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CCL1P22362 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCL1P22362 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL1P22362 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL1P22362 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CCL1P22362 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CCL1P22362 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCL1P22362 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCL1P22362 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL1P22362 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL1P22362 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL1P22362 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
CCL1P22362 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CCL1P22362 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL1P22362 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
CCL1P22362 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.7■□□□□ 0.26
CCL1P22362 TUBB8P6-201ENST00000436895 1288 ntBASIC16.7■□□□□ 0.26
CCL1P22362 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.7■□□□□ 0.26
CCL1P22362 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL1P22362 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.7■□□□□ 0.26
CCL1P22362 SOX15-203ENST00000570788 1093 ntBASIC16.7■□□□□ 0.26
CCL1P22362 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.7■□□□□ 0.26
CCL1P22362 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.7■□□□□ 0.26
CCL1P22362 AC008687.6-201ENST00000596318 630 ntBASIC16.7■□□□□ 0.26
CCL1P22362 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL1P22362 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL1P22362 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms