Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
XRCC1P18887 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
XRCC1P18887 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.36■□□□□ 0.69
XRCC1P18887 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
XRCC1P18887 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
XRCC1P18887 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
XRCC1P18887 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
XRCC1P18887 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
XRCC1P18887 KRT16P6-202ENST00000425692 1426 ntBASIC19.36■□□□□ 0.69
XRCC1P18887 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.36■□□□□ 0.69
XRCC1P18887 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
XRCC1P18887 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.36■□□□□ 0.69
XRCC1P18887 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
XRCC1P18887 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
XRCC1P18887 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
XRCC1P18887 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.36■□□□□ 0.69
XRCC1P18887 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.36■□□□□ 0.69
XRCC1P18887 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.36■□□□□ 0.69
XRCC1P18887 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.36■□□□□ 0.69
XRCC1P18887 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.36■□□□□ 0.69
XRCC1P18887 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
XRCC1P18887 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
XRCC1P18887 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
XRCC1P18887 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.36■□□□□ 0.69
XRCC1P18887 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
XRCC1P18887 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
XRCC1P18887 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
XRCC1P18887 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
XRCC1P18887 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.36■□□□□ 0.69
XRCC1P18887 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
XRCC1P18887 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.36■□□□□ 0.69
XRCC1P18887 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
XRCC1P18887 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
XRCC1P18887 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.35■□□□□ 0.69
XRCC1P18887 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
XRCC1P18887 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
XRCC1P18887 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.35■□□□□ 0.69
XRCC1P18887 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
XRCC1P18887 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.35■□□□□ 0.69
XRCC1P18887 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.35■□□□□ 0.69
XRCC1P18887 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.35■□□□□ 0.69
XRCC1P18887 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.35■□□□□ 0.69
XRCC1P18887 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
XRCC1P18887 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.35■□□□□ 0.69
XRCC1P18887 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.35■□□□□ 0.69
XRCC1P18887 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
XRCC1P18887 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
XRCC1P18887 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
XRCC1P18887 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.35■□□□□ 0.69
XRCC1P18887 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
XRCC1P18887 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
XRCC1P18887 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
XRCC1P18887 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.35■□□□□ 0.69
XRCC1P18887 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
XRCC1P18887 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
XRCC1P18887 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
XRCC1P18887 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
XRCC1P18887 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
XRCC1P18887 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
XRCC1P18887 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
XRCC1P18887 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
XRCC1P18887 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
XRCC1P18887 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.34■□□□□ 0.69
XRCC1P18887 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
XRCC1P18887 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
XRCC1P18887 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.34■□□□□ 0.69
XRCC1P18887 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.34■□□□□ 0.69
XRCC1P18887 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.34■□□□□ 0.69
XRCC1P18887 Z99916.2-201ENST00000604037 246 ntBASIC19.34■□□□□ 0.69
XRCC1P18887 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.34■□□□□ 0.69
XRCC1P18887 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.34■□□□□ 0.69
XRCC1P18887 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.34■□□□□ 0.69
XRCC1P18887 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
XRCC1P18887 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
XRCC1P18887 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.34■□□□□ 0.69
XRCC1P18887 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
XRCC1P18887 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
XRCC1P18887 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
XRCC1P18887 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
XRCC1P18887 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
XRCC1P18887 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
XRCC1P18887 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
XRCC1P18887 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.33■□□□□ 0.69
XRCC1P18887 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
XRCC1P18887 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
XRCC1P18887 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.33■□□□□ 0.68
XRCC1P18887 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.33■□□□□ 0.68
XRCC1P18887 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.33■□□□□ 0.68
XRCC1P18887 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.33■□□□□ 0.68
XRCC1P18887 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
XRCC1P18887 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.33■□□□□ 0.68
XRCC1P18887 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
XRCC1P18887 NBPF21P-201ENST00000425093 1451 ntBASIC19.33■□□□□ 0.68
XRCC1P18887 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.33■□□□□ 0.68
XRCC1P18887 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
XRCC1P18887 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.33■□□□□ 0.68
XRCC1P18887 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
XRCC1P18887 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
XRCC1P18887 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
XRCC1P18887 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms