Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.6■□□□□ 0.89
PTPN1P18031 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
PTPN1P18031 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.6■□□□□ 0.89
PTPN1P18031 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.6■□□□□ 0.89
PTPN1P18031 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
PTPN1P18031 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PTPN1P18031 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.6■□□□□ 0.89
PTPN1P18031 AC026271.3-201ENST00000571884 352 ntBASIC20.6■□□□□ 0.89
PTPN1P18031 AC125437.2-201ENST00000625180 2167 ntBASIC20.6■□□□□ 0.89
PTPN1P18031 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.6■□□□□ 0.89
PTPN1P18031 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTPN1P18031 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PTPN1P18031 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
PTPN1P18031 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.6■□□□□ 0.89
PTPN1P18031 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTPN1P18031 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.6■□□□□ 0.89
PTPN1P18031 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PTPN1P18031 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTPN1P18031 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PTPN1P18031 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTPN1P18031 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTPN1P18031 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.59■□□□□ 0.89
PTPN1P18031 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
PTPN1P18031 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PTPN1P18031 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PTPN1P18031 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTPN1P18031 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PTPN1P18031 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PTPN1P18031 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTPN1P18031 LINC01465-201ENST00000408887 1940 ntBASIC20.59■□□□□ 0.89
PTPN1P18031 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTPN1P18031 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.59■□□□□ 0.89
PTPN1P18031 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
PTPN1P18031 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.59■□□□□ 0.89
PTPN1P18031 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
PTPN1P18031 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTPN1P18031 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.59■□□□□ 0.89
PTPN1P18031 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.59■□□□□ 0.89
PTPN1P18031 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
PTPN1P18031 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PTPN1P18031 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.59■□□□□ 0.89
PTPN1P18031 AL160286.2-201ENST00000567150 934 ntBASIC20.59■□□□□ 0.89
PTPN1P18031 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTPN1P18031 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
PTPN1P18031 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.59■□□□□ 0.89
PTPN1P18031 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.59■□□□□ 0.89
PTPN1P18031 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTPN1P18031 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PTPN1P18031 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTPN1P18031 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
PTPN1P18031 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTPN1P18031 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
PTPN1P18031 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.58■□□□□ 0.89
PTPN1P18031 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.58■□□□□ 0.89
PTPN1P18031 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTPN1P18031 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PTPN1P18031 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.58■□□□□ 0.89
PTPN1P18031 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PTPN1P18031 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTPN1P18031 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTPN1P18031 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTPN1P18031 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTPN1P18031 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.58■□□□□ 0.89
PTPN1P18031 MESTP1-201ENST00000404287 994 ntBASIC20.58■□□□□ 0.89
PTPN1P18031 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTPN1P18031 AC011506.1-201ENST00000474329 610 ntBASIC20.58■□□□□ 0.89
PTPN1P18031 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PTPN1P18031 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PTPN1P18031 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.58■□□□□ 0.88
PTPN1P18031 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PTPN1P18031 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PTPN1P18031 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.58■□□□□ 0.88
PTPN1P18031 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTPN1P18031 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PTPN1P18031 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTPN1P18031 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTPN1P18031 FSCN1P1-201ENST00000568912 1481 ntBASIC20.57■□□□□ 0.88
PTPN1P18031 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PTPN1P18031 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.57■□□□□ 0.88
PTPN1P18031 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.57■□□□□ 0.88
PTPN1P18031 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.57■□□□□ 0.88
PTPN1P18031 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.57■□□□□ 0.88
PTPN1P18031 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.57■□□□□ 0.88
PTPN1P18031 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PTPN1P18031 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.57■□□□□ 0.88
PTPN1P18031 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.57■□□□□ 0.88
PTPN1P18031 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.57■□□□□ 0.88
PTPN1P18031 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.57■□□□□ 0.88
PTPN1P18031 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.57■□□□□ 0.88
PTPN1P18031 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.57■□□□□ 0.88
PTPN1P18031 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.57■□□□□ 0.88
PTPN1P18031 MIR6786-201ENST00000616843 113 ntBASIC20.57■□□□□ 0.88
PTPN1P18031 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PTPN1P18031 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.57■□□□□ 0.88
PTPN1P18031 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.57■□□□□ 0.88
PTPN1P18031 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.57■□□□□ 0.88
PTPN1P18031 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTPN1P18031 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN1P18031 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.56■□□□□ 0.88
PTPN1P18031 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms