Protein–RNA interactions for Protein: P17787

CHRNB2, Neuronal acetylcholine receptor subunit beta-2, humanhuman

Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB2P17787 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.61■□□□□ 0.89
CHRNB2P17787 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHRNB2P17787 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHRNB2P17787 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CHRNB2P17787 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHRNB2P17787 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.61■□□□□ 0.89
CHRNB2P17787 AL161938.1-201ENST00000569833 2180 ntBASIC20.61■□□□□ 0.89
CHRNB2P17787 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CHRNB2P17787 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
CHRNB2P17787 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CHRNB2P17787 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHRNB2P17787 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.61■□□□□ 0.89
CHRNB2P17787 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.61■□□□□ 0.89
CHRNB2P17787 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
CHRNB2P17787 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.61■□□□□ 0.89
CHRNB2P17787 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.61■□□□□ 0.89
CHRNB2P17787 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.61■□□□□ 0.89
CHRNB2P17787 AC069544.1-201ENST00000609399 999 ntBASIC20.61■□□□□ 0.89
CHRNB2P17787 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHRNB2P17787 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CHRNB2P17787 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHRNB2P17787 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CHRNB2P17787 AL049812.1-201ENST00000432563 2267 ntBASIC20.61■□□□□ 0.89
CHRNB2P17787 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHRNB2P17787 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHRNB2P17787 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHRNB2P17787 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHRNB2P17787 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHRNB2P17787 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.6■□□□□ 0.89
CHRNB2P17787 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHRNB2P17787 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHRNB2P17787 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHRNB2P17787 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHRNB2P17787 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHRNB2P17787 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.6■□□□□ 0.89
CHRNB2P17787 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
CHRNB2P17787 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHRNB2P17787 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.6■□□□□ 0.89
CHRNB2P17787 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.6■□□□□ 0.89
CHRNB2P17787 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.6■□□□□ 0.89
CHRNB2P17787 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.6■□□□□ 0.89
CHRNB2P17787 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHRNB2P17787 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHRNB2P17787 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHRNB2P17787 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHRNB2P17787 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.6■□□□□ 0.89
CHRNB2P17787 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.6■□□□□ 0.89
CHRNB2P17787 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHRNB2P17787 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHRNB2P17787 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHRNB2P17787 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.6■□□□□ 0.89
CHRNB2P17787 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNB2P17787 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CHRNB2P17787 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CHRNB2P17787 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNB2P17787 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNB2P17787 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNB2P17787 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNB2P17787 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNB2P17787 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.59■□□□□ 0.89
CHRNB2P17787 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNB2P17787 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
CHRNB2P17787 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNB2P17787 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.59■□□□□ 0.89
CHRNB2P17787 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.59■□□□□ 0.89
CHRNB2P17787 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNB2P17787 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNB2P17787 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNB2P17787 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.59■□□□□ 0.89
CHRNB2P17787 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNB2P17787 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNB2P17787 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNB2P17787 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNB2P17787 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CHRNB2P17787 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.58■□□□□ 0.89
CHRNB2P17787 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHRNB2P17787 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHRNB2P17787 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.58■□□□□ 0.89
CHRNB2P17787 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.58■□□□□ 0.89
CHRNB2P17787 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHRNB2P17787 NBPF21P-201ENST00000425093 1451 ntBASIC20.58■□□□□ 0.89
CHRNB2P17787 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHRNB2P17787 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.58■□□□□ 0.89
CHRNB2P17787 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.58■□□□□ 0.89
CHRNB2P17787 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.58■□□□□ 0.89
CHRNB2P17787 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHRNB2P17787 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHRNB2P17787 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHRNB2P17787 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHRNB2P17787 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
CHRNB2P17787 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.88
CHRNB2P17787 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHRNB2P17787 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHRNB2P17787 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
CHRNB2P17787 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHRNB2P17787 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHRNB2P17787 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.57■□□□□ 0.88
CHRNB2P17787 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHRNB2P17787 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CHRNB2P17787 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms