Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.76■□□□□ 0.43
BMP4P12644 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BMP4P12644 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
BMP4P12644 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.76■□□□□ 0.43
BMP4P12644 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
BMP4P12644 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BMP4P12644 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BMP4P12644 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.76■□□□□ 0.43
BMP4P12644 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.76■□□□□ 0.43
BMP4P12644 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BMP4P12644 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
BMP4P12644 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BMP4P12644 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.76■□□□□ 0.43
BMP4P12644 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
BMP4P12644 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
BMP4P12644 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BMP4P12644 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
BMP4P12644 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.76■□□□□ 0.43
BMP4P12644 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.76■□□□□ 0.43
BMP4P12644 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.76■□□□□ 0.43
BMP4P12644 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
BMP4P12644 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
BMP4P12644 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.76■□□□□ 0.43
BMP4P12644 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BMP4P12644 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BMP4P12644 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.76■□□□□ 0.43
BMP4P12644 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
BMP4P12644 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.76■□□□□ 0.43
BMP4P12644 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BMP4P12644 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
BMP4P12644 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
BMP4P12644 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
BMP4P12644 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
BMP4P12644 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
BMP4P12644 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.75■□□□□ 0.43
BMP4P12644 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BMP4P12644 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
BMP4P12644 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
BMP4P12644 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BMP4P12644 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BMP4P12644 LSM12P1-201ENST00000411836 588 ntBASIC17.75■□□□□ 0.43
BMP4P12644 FAM21FP-204ENST00000608637 956 ntBASIC17.75■□□□□ 0.43
BMP4P12644 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.75■□□□□ 0.43
BMP4P12644 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.75■□□□□ 0.43
BMP4P12644 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.75■□□□□ 0.43
BMP4P12644 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
BMP4P12644 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
BMP4P12644 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
BMP4P12644 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.75■□□□□ 0.43
BMP4P12644 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BMP4P12644 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BMP4P12644 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
BMP4P12644 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
BMP4P12644 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
BMP4P12644 AC010980.2-201ENST00000587099 1412 ntBASIC17.74■□□□□ 0.43
BMP4P12644 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.74■□□□□ 0.43
BMP4P12644 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
BMP4P12644 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.74■□□□□ 0.43
BMP4P12644 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BMP4P12644 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BMP4P12644 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
BMP4P12644 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
BMP4P12644 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.74■□□□□ 0.43
BMP4P12644 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.74■□□□□ 0.43
BMP4P12644 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
BMP4P12644 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.74■□□□□ 0.43
BMP4P12644 AC093787.1-201ENST00000450396 207 ntBASIC17.74■□□□□ 0.43
BMP4P12644 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.74■□□□□ 0.43
BMP4P12644 AC100791.3-201ENST00000617619 330 ntBASIC17.74■□□□□ 0.43
BMP4P12644 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.74■□□□□ 0.43
BMP4P12644 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BMP4P12644 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
BMP4P12644 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
BMP4P12644 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.74■□□□□ 0.43
BMP4P12644 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BMP4P12644 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
BMP4P12644 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.74■□□□□ 0.43
BMP4P12644 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BMP4P12644 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
BMP4P12644 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.74■□□□□ 0.43
BMP4P12644 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BMP4P12644 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BMP4P12644 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
BMP4P12644 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
BMP4P12644 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
BMP4P12644 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BMP4P12644 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BMP4P12644 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.73■□□□□ 0.43
BMP4P12644 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
BMP4P12644 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BMP4P12644 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.73■□□□□ 0.43
BMP4P12644 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
BMP4P12644 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.73■□□□□ 0.43
BMP4P12644 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.73■□□□□ 0.43
BMP4P12644 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.73■□□□□ 0.43
BMP4P12644 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BMP4P12644 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.73■□□□□ 0.43
BMP4P12644 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.73■□□□□ 0.43
BMP4P12644 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
BMP4P12644 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms