Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHRNB1P11230 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.72■□□□□ 0.75
CHRNB1P11230 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHRNB1P11230 DUSP5P1-201ENST00000441325 1139 ntBASIC19.72■□□□□ 0.75
CHRNB1P11230 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHRNB1P11230 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.72■□□□□ 0.75
CHRNB1P11230 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.72■□□□□ 0.75
CHRNB1P11230 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHRNB1P11230 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.72■□□□□ 0.75
CHRNB1P11230 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.72■□□□□ 0.75
CHRNB1P11230 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.72■□□□□ 0.75
CHRNB1P11230 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.72■□□□□ 0.75
CHRNB1P11230 AC140113.3-201ENST00000605663 199 ntBASIC19.72■□□□□ 0.75
CHRNB1P11230 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.72■□□□□ 0.75
CHRNB1P11230 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CHRNB1P11230 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHRNB1P11230 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CHRNB1P11230 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHRNB1P11230 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHRNB1P11230 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHRNB1P11230 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHRNB1P11230 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHRNB1P11230 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHRNB1P11230 AL359075.1-203ENST00000462729 1002 ntBASIC19.71■□□□□ 0.75
CHRNB1P11230 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.71■□□□□ 0.75
CHRNB1P11230 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.71■□□□□ 0.75
CHRNB1P11230 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.71■□□□□ 0.75
CHRNB1P11230 AC093458.2-201ENST00000623150 629 ntBASIC19.71■□□□□ 0.75
CHRNB1P11230 AL023973.1-201ENST00000624619 620 ntBASIC19.71■□□□□ 0.75
CHRNB1P11230 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CHRNB1P11230 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHRNB1P11230 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CHRNB1P11230 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHRNB1P11230 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CHRNB1P11230 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHRNB1P11230 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHRNB1P11230 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.7■□□□□ 0.74
CHRNB1P11230 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHRNB1P11230 PRSS44-201ENST00000515154 1146 ntBASIC19.7■□□□□ 0.74
CHRNB1P11230 AL160286.2-201ENST00000567150 934 ntBASIC19.7■□□□□ 0.74
CHRNB1P11230 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.7■□□□□ 0.74
CHRNB1P11230 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHRNB1P11230 AC116407.4-201ENST00000623319 1061 ntBASIC19.7■□□□□ 0.74
CHRNB1P11230 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.7■□□□□ 0.74
CHRNB1P11230 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHRNB1P11230 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.7■□□□□ 0.74
CHRNB1P11230 AC005332.1-201ENST00000577698 1310 ntBASIC19.7■□□□□ 0.74
CHRNB1P11230 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHRNB1P11230 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.69■□□□□ 0.74
CHRNB1P11230 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHRNB1P11230 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHRNB1P11230 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.69■□□□□ 0.74
CHRNB1P11230 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.69■□□□□ 0.74
CHRNB1P11230 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
CHRNB1P11230 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHRNB1P11230 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.69■□□□□ 0.74
CHRNB1P11230 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHRNB1P11230 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CHRNB1P11230 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.69■□□□□ 0.74
CHRNB1P11230 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.69■□□□□ 0.74
CHRNB1P11230 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.69■□□□□ 0.74
CHRNB1P11230 AC008622.2-201ENST00000617006 1229 ntBASIC19.69■□□□□ 0.74
CHRNB1P11230 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.69■□□□□ 0.74
CHRNB1P11230 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHRNB1P11230 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHRNB1P11230 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHRNB1P11230 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHRNB1P11230 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CHRNB1P11230 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHRNB1P11230 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CHRNB1P11230 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHRNB1P11230 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHRNB1P11230 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CHRNB1P11230 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHRNB1P11230 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHRNB1P11230 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHRNB1P11230 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHRNB1P11230 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHRNB1P11230 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHRNB1P11230 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHRNB1P11230 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHRNB1P11230 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.68■□□□□ 0.74
CHRNB1P11230 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.68■□□□□ 0.74
CHRNB1P11230 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.68■□□□□ 0.74
CHRNB1P11230 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHRNB1P11230 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHRNB1P11230 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHRNB1P11230 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHRNB1P11230 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHRNB1P11230 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.67■□□□□ 0.74
CHRNB1P11230 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CHRNB1P11230 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CHRNB1P11230 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHRNB1P11230 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CHRNB1P11230 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CHRNB1P11230 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHRNB1P11230 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CHRNB1P11230 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CHRNB1P11230 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.67■□□□□ 0.74
CHRNB1P11230 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms