Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.73■□□□□ 0.59
CCNYL3P0C7X3 AC097493.4-201ENST00000641197 219 ntBASIC18.73■□□□□ 0.59
CCNYL3P0C7X3 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CCNYL3P0C7X3 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCNYL3P0C7X3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCNYL3P0C7X3 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCNYL3P0C7X3 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCNYL3P0C7X3 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CCNYL3P0C7X3 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCNYL3P0C7X3 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCNYL3P0C7X3 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCNYL3P0C7X3 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCNYL3P0C7X3 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCNYL3P0C7X3 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCNYL3P0C7X3 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCNYL3P0C7X3 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCNYL3P0C7X3 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCNYL3P0C7X3 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.72■□□□□ 0.59
CCNYL3P0C7X3 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
CCNYL3P0C7X3 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CCNYL3P0C7X3 UNC93B2-201ENST00000285383 730 ntBASIC18.72■□□□□ 0.59
CCNYL3P0C7X3 KSR1P1-201ENST00000446298 240 ntBASIC18.72■□□□□ 0.59
CCNYL3P0C7X3 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCNYL3P0C7X3 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CCNYL3P0C7X3 CR392000.1-201ENST00000624770 1228 ntBASIC18.72■□□□□ 0.59
CCNYL3P0C7X3 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.72■□□□□ 0.59
CCNYL3P0C7X3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCNYL3P0C7X3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCNYL3P0C7X3 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.72■□□□□ 0.59
CCNYL3P0C7X3 KRT16P6-202ENST00000425692 1426 ntBASIC18.72■□□□□ 0.59
CCNYL3P0C7X3 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCNYL3P0C7X3 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCNYL3P0C7X3 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CCNYL3P0C7X3 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.72■□□□□ 0.59
CCNYL3P0C7X3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.72■□□□□ 0.59
CCNYL3P0C7X3 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCNYL3P0C7X3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.71■□□□□ 0.59
CCNYL3P0C7X3 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCNYL3P0C7X3 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCNYL3P0C7X3 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCNYL3P0C7X3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.71■□□□□ 0.59
CCNYL3P0C7X3 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCNYL3P0C7X3 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCNYL3P0C7X3 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.71■□□□□ 0.59
CCNYL3P0C7X3 AP006587.1-201ENST00000534129 1502 ntBASIC18.71■□□□□ 0.59
CCNYL3P0C7X3 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CCNYL3P0C7X3 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCNYL3P0C7X3 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.71■□□□□ 0.59
CCNYL3P0C7X3 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCNYL3P0C7X3 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCNYL3P0C7X3 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCNYL3P0C7X3 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.71■□□□□ 0.59
CCNYL3P0C7X3 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.71■□□□□ 0.59
CCNYL3P0C7X3 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.71■□□□□ 0.59
CCNYL3P0C7X3 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
CCNYL3P0C7X3 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCNYL3P0C7X3 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCNYL3P0C7X3 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCNYL3P0C7X3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
CCNYL3P0C7X3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCNYL3P0C7X3 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CCNYL3P0C7X3 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.71■□□□□ 0.59
CCNYL3P0C7X3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCNYL3P0C7X3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.71■□□□□ 0.59
CCNYL3P0C7X3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCNYL3P0C7X3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.58
CCNYL3P0C7X3 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.7■□□□□ 0.58
CCNYL3P0C7X3 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
CCNYL3P0C7X3 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCNYL3P0C7X3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.7■□□□□ 0.58
CCNYL3P0C7X3 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCNYL3P0C7X3 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCNYL3P0C7X3 DPP3P2-201ENST00000416030 1696 ntBASIC18.7■□□□□ 0.58
CCNYL3P0C7X3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.7■□□□□ 0.58
CCNYL3P0C7X3 AFG3L1P-217ENST00000557444 2447 ntBASIC18.7■□□□□ 0.58
CCNYL3P0C7X3 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.7■□□□□ 0.58
CCNYL3P0C7X3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCNYL3P0C7X3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCNYL3P0C7X3 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCNYL3P0C7X3 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCNYL3P0C7X3 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCNYL3P0C7X3 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCNYL3P0C7X3 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.7■□□□□ 0.58
CCNYL3P0C7X3 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.7■□□□□ 0.58
CCNYL3P0C7X3 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.7■□□□□ 0.58
CCNYL3P0C7X3 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.7■□□□□ 0.58
CCNYL3P0C7X3 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCNYL3P0C7X3 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.7■□□□□ 0.58
CCNYL3P0C7X3 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.7■□□□□ 0.58
CCNYL3P0C7X3 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCNYL3P0C7X3 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCNYL3P0C7X3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.7■□□□□ 0.58
CCNYL3P0C7X3 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.7■□□□□ 0.58
CCNYL3P0C7X3 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCNYL3P0C7X3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCNYL3P0C7X3 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.7■□□□□ 0.58
CCNYL3P0C7X3 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CCNYL3P0C7X3 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CCNYL3P0C7X3 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCNYL3P0C7X3 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms