Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CAPN1P07384 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CAPN1P07384 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CAPN1P07384 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CAPN1P07384 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CAPN1P07384 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CAPN1P07384 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CAPN1P07384 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CAPN1P07384 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CAPN1P07384 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CAPN1P07384 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.09■□□□□ 0.65
CAPN1P07384 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CAPN1P07384 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.09■□□□□ 0.65
CAPN1P07384 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CAPN1P07384 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
CAPN1P07384 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CAPN1P07384 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.09■□□□□ 0.65
CAPN1P07384 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CAPN1P07384 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.09■□□□□ 0.65
CAPN1P07384 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CAPN1P07384 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.09■□□□□ 0.65
CAPN1P07384 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.09■□□□□ 0.65
CAPN1P07384 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CAPN1P07384 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.09■□□□□ 0.65
CAPN1P07384 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CAPN1P07384 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.09■□□□□ 0.65
CAPN1P07384 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CAPN1P07384 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CAPN1P07384 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.09■□□□□ 0.65
CAPN1P07384 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CAPN1P07384 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
CAPN1P07384 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.65
CAPN1P07384 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.08■□□□□ 0.65
CAPN1P07384 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CAPN1P07384 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
CAPN1P07384 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.08■□□□□ 0.65
CAPN1P07384 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.08■□□□□ 0.65
CAPN1P07384 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CAPN1P07384 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
CAPN1P07384 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CAPN1P07384 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CAPN1P07384 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
CAPN1P07384 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.08■□□□□ 0.64
CAPN1P07384 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.08■□□□□ 0.64
CAPN1P07384 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.08■□□□□ 0.64
CAPN1P07384 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.08■□□□□ 0.64
CAPN1P07384 AC006557.6-201ENST00000623071 864 ntBASIC19.08■□□□□ 0.64
CAPN1P07384 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.08■□□□□ 0.64
CAPN1P07384 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
CAPN1P07384 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
CAPN1P07384 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.08■□□□□ 0.64
CAPN1P07384 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CAPN1P07384 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CAPN1P07384 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.08■□□□□ 0.64
CAPN1P07384 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.08■□□□□ 0.64
CAPN1P07384 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CAPN1P07384 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CAPN1P07384 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CAPN1P07384 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.08■□□□□ 0.64
CAPN1P07384 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
CAPN1P07384 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.07■□□□□ 0.64
CAPN1P07384 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
CAPN1P07384 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.07■□□□□ 0.64
CAPN1P07384 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN1P07384 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN1P07384 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CAPN1P07384 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.07■□□□□ 0.64
CAPN1P07384 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.07■□□□□ 0.64
CAPN1P07384 MTDHP1-201ENST00000605323 784 ntBASIC19.07■□□□□ 0.64
CAPN1P07384 FAM197Y4-202ENST00000622692 608 ntBASIC19.07■□□□□ 0.64
CAPN1P07384 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN1P07384 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.07■□□□□ 0.64
CAPN1P07384 AC098818.2-201ENST00000564925 2320 ntBASIC19.07■□□□□ 0.64
CAPN1P07384 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN1P07384 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CAPN1P07384 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.07■□□□□ 0.64
CAPN1P07384 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN1P07384 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN1P07384 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.06■□□□□ 0.64
CAPN1P07384 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN1P07384 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN1P07384 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
CAPN1P07384 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN1P07384 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN1P07384 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CAPN1P07384 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN1P07384 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CAPN1P07384 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN1P07384 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CAPN1P07384 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.06■□□□□ 0.64
CAPN1P07384 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN1P07384 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.06■□□□□ 0.64
CAPN1P07384 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN1P07384 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CAPN1P07384 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.06■□□□□ 0.64
CAPN1P07384 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.06■□□□□ 0.64
CAPN1P07384 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.06■□□□□ 0.64
CAPN1P07384 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CAPN1P07384 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
CAPN1P07384 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms