Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CTSDP07339 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CTSDP07339 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CTSDP07339 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CTSDP07339 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC16.13■□□□□ 0.17
CTSDP07339 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.13■□□□□ 0.17
CTSDP07339 AC023632.3-201ENST00000521633 145 ntBASIC16.13■□□□□ 0.17
CTSDP07339 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC16.13■□□□□ 0.17
CTSDP07339 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CTSDP07339 AC010536.3-201ENST00000620306 533 ntBASIC16.13■□□□□ 0.17
CTSDP07339 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CTSDP07339 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CTSDP07339 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CTSDP07339 WIZP1-201ENST00000531444 2299 ntBASIC16.13■□□□□ 0.17
CTSDP07339 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CTSDP07339 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CTSDP07339 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CTSDP07339 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.13■□□□□ 0.17
CTSDP07339 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CTSDP07339 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CTSDP07339 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CTSDP07339 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CTSDP07339 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.12■□□□□ 0.17
CTSDP07339 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CTSDP07339 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.12■□□□□ 0.17
CTSDP07339 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
CTSDP07339 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CTSDP07339 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.12■□□□□ 0.17
CTSDP07339 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CTSDP07339 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.12■□□□□ 0.17
CTSDP07339 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CTSDP07339 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CTSDP07339 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CTSDP07339 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC16.12■□□□□ 0.17
CTSDP07339 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CTSDP07339 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CTSDP07339 YBX1P1-201ENST00000445822 960 ntBASIC16.12■□□□□ 0.17
CTSDP07339 AC007322.4-201ENST00000509611 723 ntBASIC16.12■□□□□ 0.17
CTSDP07339 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CTSDP07339 SP2-202ENST00000613139 908 ntTSL 5 BASIC16.12■□□□□ 0.17
CTSDP07339 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CTSDP07339 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CTSDP07339 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CTSDP07339 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CTSDP07339 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CTSDP07339 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CTSDP07339 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CTSDP07339 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.12■□□□□ 0.17
CTSDP07339 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CTSDP07339 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.12■□□□□ 0.17
CTSDP07339 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CTSDP07339 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.11■□□□□ 0.17
CTSDP07339 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CTSDP07339 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.11■□□□□ 0.17
CTSDP07339 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.11■□□□□ 0.17
CTSDP07339 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CTSDP07339 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CTSDP07339 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
CTSDP07339 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CTSDP07339 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CTSDP07339 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CTSDP07339 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CTSDP07339 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CTSDP07339 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.11■□□□□ 0.17
CTSDP07339 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CTSDP07339 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CTSDP07339 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CTSDP07339 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC16.11■□□□□ 0.17
CTSDP07339 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC16.11■□□□□ 0.17
CTSDP07339 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC16.11■□□□□ 0.17
CTSDP07339 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC16.11■□□□□ 0.17
CTSDP07339 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC16.11■□□□□ 0.17
CTSDP07339 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC16.11■□□□□ 0.17
CTSDP07339 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CTSDP07339 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CTSDP07339 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CTSDP07339 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CTSDP07339 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CTSDP07339 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.11■□□□□ 0.17
CTSDP07339 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CTSDP07339 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CTSDP07339 GCK-205ENST00000437084 1385 ntTSL 5 BASIC16.11■□□□□ 0.17
CTSDP07339 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CTSDP07339 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CTSDP07339 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CTSDP07339 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CTSDP07339 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CTSDP07339 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.1■□□□□ 0.17
CTSDP07339 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CTSDP07339 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CTSDP07339 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CTSDP07339 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.1■□□□□ 0.17
CTSDP07339 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
CTSDP07339 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CTSDP07339 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.1■□□□□ 0.17
CTSDP07339 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CTSDP07339 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.1■□□□□ 0.17
CTSDP07339 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CTSDP07339 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
CTSDP07339 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms