Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 AC005332.7-201ENST00000614046 2005 ntBASIC19.89■□□□□ 0.77
TOP3BO95985 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.89■□□□□ 0.77
TOP3BO95985 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
TOP3BO95985 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TOP3BO95985 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TOP3BO95985 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TOP3BO95985 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
TOP3BO95985 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.88■□□□□ 0.77
TOP3BO95985 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TOP3BO95985 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TOP3BO95985 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TOP3BO95985 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.88■□□□□ 0.77
TOP3BO95985 AL135905.2-201ENST00000584934 1404 ntBASIC19.88■□□□□ 0.77
TOP3BO95985 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.88■□□□□ 0.77
TOP3BO95985 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TOP3BO95985 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TOP3BO95985 CDV3P1-201ENST00000471403 739 ntBASIC19.88■□□□□ 0.77
TOP3BO95985 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TOP3BO95985 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.88■□□□□ 0.77
TOP3BO95985 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.88■□□□□ 0.77
TOP3BO95985 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TOP3BO95985 AC110285.5-201ENST00000611501 352 ntBASIC19.88■□□□□ 0.77
TOP3BO95985 AL356652.1-201ENST00000615962 565 ntBASIC19.88■□□□□ 0.77
TOP3BO95985 AC092865.7-201ENST00000641832 219 ntBASIC19.88■□□□□ 0.77
TOP3BO95985 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TOP3BO95985 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TOP3BO95985 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TOP3BO95985 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TOP3BO95985 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TOP3BO95985 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.88■□□□□ 0.77
TOP3BO95985 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.88■□□□□ 0.77
TOP3BO95985 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TOP3BO95985 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TOP3BO95985 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TOP3BO95985 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TOP3BO95985 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.87■□□□□ 0.77
TOP3BO95985 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TOP3BO95985 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
TOP3BO95985 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TOP3BO95985 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.87■□□□□ 0.77
TOP3BO95985 AC087633.2-202ENST00000565166 1439 ntBASIC19.87■□□□□ 0.77
TOP3BO95985 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TOP3BO95985 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TOP3BO95985 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TOP3BO95985 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TOP3BO95985 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
TOP3BO95985 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
TOP3BO95985 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TOP3BO95985 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TOP3BO95985 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TOP3BO95985 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.87■□□□□ 0.77
TOP3BO95985 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
TOP3BO95985 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.87■□□□□ 0.77
TOP3BO95985 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
TOP3BO95985 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.87■□□□□ 0.77
TOP3BO95985 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TOP3BO95985 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.87■□□□□ 0.77
TOP3BO95985 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.87■□□□□ 0.77
TOP3BO95985 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TOP3BO95985 CYP21A1P-202ENST00000354927 1481 ntBASIC19.86■□□□□ 0.77
TOP3BO95985 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TOP3BO95985 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TOP3BO95985 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TOP3BO95985 MMP23A-201ENST00000234610 1017 ntBASIC19.86■□□□□ 0.77
TOP3BO95985 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.86■□□□□ 0.77
TOP3BO95985 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TOP3BO95985 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TOP3BO95985 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.86■□□□□ 0.77
TOP3BO95985 MIR6786-201ENST00000616843 113 ntBASIC19.86■□□□□ 0.77
TOP3BO95985 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
TOP3BO95985 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.86■□□□□ 0.77
TOP3BO95985 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.86■□□□□ 0.77
TOP3BO95985 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TOP3BO95985 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TOP3BO95985 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TOP3BO95985 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.85■□□□□ 0.77
TOP3BO95985 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.85■□□□□ 0.77
TOP3BO95985 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TOP3BO95985 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TOP3BO95985 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TOP3BO95985 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TOP3BO95985 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TOP3BO95985 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.85■□□□□ 0.77
TOP3BO95985 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TOP3BO95985 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TOP3BO95985 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TOP3BO95985 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TOP3BO95985 PTBP1P-201ENST00000554374 1601 ntBASIC19.85■□□□□ 0.77
TOP3BO95985 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
TOP3BO95985 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TOP3BO95985 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TOP3BO95985 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TOP3BO95985 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
TOP3BO95985 AC005521.1-201ENST00000393351 872 ntBASIC19.85■□□□□ 0.77
TOP3BO95985 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
TOP3BO95985 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TOP3BO95985 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.85■□□□□ 0.77
TOP3BO95985 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.85■□□□□ 0.77
TOP3BO95985 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.85■□□□□ 0.77
TOP3BO95985 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms